Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00247 atgattcttccactttcatcacaaattgtaaaagctacaggagttgtcacagaaacagcatgggcaggtgctgcttacaacctcatgctttacatgttggccagccatATTTTAGGAGCTTGCTGGTACCTTCTATCAATTGAACGTCAAGAAGCATGTTGGAGAAATGTTTGCAAAATGGAGAAATCGTATTGTGAATATGGATTCTTTGATTGCCACAGGGTTAAAGAAGCCCTCAGGGAATCTAAGGTTCCATTATTTGATCAAATGGATGAGAGGATGATAGACGCAATATGCGAAAGACTAAAGCCTGCATTGTGCACTGAAGGAACTTATCCAAGACTAAGGTGA 351 0.2735 MILPLSSQIVKATGVVTETAWAGAAYNLMLYMLASHILGACWYLLSIERQEACWRNVCKMEKSYCEYGFFDCHRVKEALRESKVPLFDQMDERMIDAICERLKPALCTEGTYPRLR 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00247 116 PANTHER - 1 78 - -
Car05g00247 116 PANTHER - 83 111 - -
Car05g00247 116 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 78 - -
Car05g00247 116 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 83 111 - -
Car05g00247 116 Pfam Ion transport protein 16 74 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00247 Car-Chr5 5783077 5785638 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00247 1 82 Ion Channels AT2G28260 71.951 2.93e-39 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00247 K05391 - gmx:100811847 160.229