Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00242 ATGCTAGACGCAATATGCGAAAGACTAAAGCCTGCATTGTGCACTAAGGGAACTTATCTTGTTCGCGAAGGTGATCCAGTGAACGAGATGCTATTTATAACCCGAGGAAATCTTTATTCTTACACCACAAATGGAGGCCGAGTCGGATTCTTCAACTCATGTCGAATTGGACCAGATGATTTTTGTGGTGAAGAACTGTTAACATGGGCCTTTGATCCAAGACCAAGTGTGATACTCCTTTTGTCAACAAGAACAGCTAAAGCTATCTCAGAAGTTGAAGCCTTTACACTCATAGCCGAGACATTAAGTTTGTTGCATCTCAATTTAGAAGACTGCATAGTAGACAACTTAGGCATAAATTAG 363 0.4077 MLDAICERLKPALCTKGTYLVREGDPVNEMLFITRGNLYSYTTNGGRVGFFNSCRIGPDDFCGEELLTWAFDPRPSVILLLSTRTAKAISEVEAFTLIAETLSLLHLNLEDCIVDNLGIN 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00242 120 ProSiteProfiles cAMP/cGMP binding motif profile. 1 115 IPR000595 -
Car05g00242 120 PANTHER - 1 104 - -
Car05g00242 120 CDD CAP_ED 2 97 IPR000595 -
Car05g00242 120 Gene3D Jelly Rolls 1 107 IPR014710 -
Car05g00242 120 SUPERFAMILY cAMP-binding domain-like 2 102 IPR018490 -
Car05g00242 120 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00242 Car-Chr5 5750744 5751106 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00242 1 105 Ion Channels AT2G28260 80.952 2.06e-56 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00242 K05391 - dcr:108219416 182.57