Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00236 ATGGCATCAAGTTCAATGTCAGCATCAGGTTCATGGAGTACTAAGGAAAATAAGGCATTTGAAAGAGCATTGGCTGTTTTCGATAAGGACACGCCCGATCGTTGGTCGAACGTCGCCCACGCCGTTGGTGGAGGGAAGACTGCTGATGAAGTTAAGAGACACTATGAACATCTTCTTAGGGATGTTAGGCACATTGAATCAGGTCAAGTTCCATTCCCTAAGTACAAGAACATTGGAGGCTTAGATGAAGAGAAAAGGCTGAGAAACCTGAAGCTCTAG 279 0.4516 MASSSMSASGSWSTKENKAFERALAVFDKDTPDRWSNVAHAVGGGKTADEVKRHYEHLLRDVRHIESGQVPFPKYKNIGGLDEEKRLRNLKL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00236 92 ProSiteProfiles Myb-like domain profile. 4 59 IPR001005 -
Car05g00236 92 SUPERFAMILY Homeodomain-like 10 67 IPR009057 -
Car05g00236 92 Gene3D - 2 72 - -
Car05g00236 92 SMART sant 8 61 IPR001005 -
Car05g00236 92 Pfam Myb-like DNA-binding domain 10 57 IPR001005 -
Car05g00236 92 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 1 92 - -
Car05g00236 92 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 92 IPR044636 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00236 Car-Chr5 5643291 5644615 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Car05g00236 Myb_DNA-binding 7.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00236 - - gmx:100804396 150.214