Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00224 ATGGCAAAAAAACTCATCCTCATTTCTATCCTTAAATTTCTCACCTTCATGACCCTTTTCACAAAATCAAACACACAATCACCAAACTATGTAGGTGATGATTGTCACAACTCAAAAGAACAATCCCTTACAAAAACATACAAATCCAACCTTAATAAAGTCCTCTCATGGTTATCTTCTGATGCTCTCACAAGCAAAGGATATAACCATACAAACATAGGAGGAAACACAGTTGATGGTGTCTATGGTCTCTATGATTGTAGAGGTGATGTCACAGGATCATTTTGTCAATTTTGTGTTTCAACTGCAGCCTCAGATATTCTTCAGCACTGTCCTAATAGAGCCTCAGCTGTGATTTGGTACAACTTTTGCATTCTAAGGTATTCCAATCATGATTTCTTTGGGAACCTAACAATAACACCATCATGGCAAATTTTGGGGTCAAAAAACATAACTAAGCCACAAGAACTTGAGAAAGCTGAGGATAATATGCAAAGTTTAATAAGAGAAGCTACATTGGTGACCCATAATTTGTATGCAATGGGAGAGTTCAATTTGAGTAATAGTCCTTCTTCTCAAAAAAGGTATGGATTGGTGCAATGTAGTAGGGACCTCAGTGACAATCAATGTAGCCAATGTTTGGAGGATATGTTAGACAAAGTTCCTAAATGTTGTGGGACAAAGATTGGTTGGCAGGTTCTTGCCCCAAGTTGTTTGATAAAATATGATGATTATATGTTCTTTCAACTTATTTCTCAAACATCAGCTCCTTTGCCTAATCCAGCTGATCAAGGAGGTTCAAGTAAATCAATTACATTGATCATCATCACTATAGTCATTGTGTTGGTGGCACTTGCTCTCATTAGTTGTTGTATCTACTTCATATGGAGGAGGTATCAATCAAATAAAGATGGATTGCCATTAGAGTCTCTTGATGACCTTATTCAAGGAGAGGATTCACTCCATGGAGACCTACCTACAATCCCTTTAATTTGGATTAGACAAAGCACTAATAACTTTTCAGAGCTATGTCAACTAGGAGAAGGTGGATTTGGCCCTGTTTACAAGGGTAATTTAGTAGATGGAACAGAAGTTGCAATCAAAAGACTCTCTAAAACATCTTGTCAAGGTTTAGAGGAGTTCAAGAATGAAGTAATTTTTATTGCTAAATTACAACATAGAAATCTTGTGAGACTTTTGGGTTGCTGCATTGAAGAAAATGAAAAGCTACTTGTATATGAATACATGTCCAACTCTAGCCTTTCCTTTCACCTATTTAATGAGGAAAAAAGAAATCATCTAGATTGGAAGTTAAGATTTAGCATTGTTAATGGAATTGCAAAAGGACTCTTGTACCTTCATGAAGACTCTAGACTTAGAGTAATTCATAGAGACTTAAAAGCTAGTAATGTTCTTTTAGATCAAGAGATGAATCCAAAAATATCAGATTTTGGATTAGCAAGAGCATTTGAAAAAGGTCAAAGTGAAGAAAATACCGCAAGAATAATGGGTACATATGGATATATGTCTCCAGAATATGCCATGGAAGGATTATATTCAGTAAAATCTGATGTTTTTAGCTTTGGAGTTCTTTTATTAGAAATAATTTGTGGAAAAAGGAATAGTGGATTCTATCTTGCAGATCATGGTCAAACTCTTCTTATATATAGTTGGAGACTTTGGTGTGAAGGAAAATGTTTGGAACTCTTAGATCCAATACTGGAAAAAACATACATAGCCAATGAAGTTATGAAGTGCATCCACATTGGTTTGTTGTGTGTACAAGAAGATGCAATTGATAGACCAAACATGTCAAATGTTGTTGTCATGTTGGCAAGTGACACAATGACACTTCCTAATCCTAATCATCCTGCATTTTCAGTTGGAAGAAGAGTTAGAGAAGATGAATCAACATCAAAGGCTTCCAAAGACATTTCTGGTAATGAAATAACAATGTCAAATATTTTACCTAGGTAG 1977 0.3536 MAKKLILISILKFLTFMTLFTKSNTQSPNYVGDDCHNSKEQSLTKTYKSNLNKVLSWLSSDALTSKGYNHTNIGGNTVDGVYGLYDCRGDVTGSFCQFCVSTAASDILQHCPNRASAVIWYNFCILRYSNHDFFGNLTITPSWQILGSKNITKPQELEKAEDNMQSLIREATLVTHNLYAMGEFNLSNSPSSQKRYGLVQCSRDLSDNQCSQCLEDMLDKVPKCCGTKIGWQVLAPSCLIKYDDYMFFQLISQTSAPLPNPADQGGSSKSITLIIITIVIVLVALALISCCIYFIWRRYQSNKDGLPLESLDDLIQGEDSLHGDLPTIPLIWIRQSTNNFSELCQLGEGGFGPVYKGNLVDGTEVAIKRLSKTSCQGLEEFKNEVIFIAKLQHRNLVRLLGCCIEENEKLLVYEYMSNSSLSFHLFNEEKRNHLDWKLRFSIVNGIAKGLLYLHEDSRLRVIHRDLKASNVLLDQEMNPKISDFGLARAFEKGQSEENTARIMGTYGYMSPEYAMEGLYSVKSDVFSFGVLLLEIICGKRNSGFYLADHGQTLLIYSWRLWCEGKCLELLDPILEKTYIANEVMKCIHIGLLCVQEDAIDRPNMSNVVVMLASDTMTLPNPNHPAFSVGRRVREDESTSKASKDISGNEITMSNILPR 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00224 658 Gene3D Phosphorylase Kinase; domain 1 313 415 - -
Car05g00224 658 Pfam Domain of unknown function (DUF3403) 613 658 IPR021820 GO:0004674
Car05g00224 658 ProSiteProfiles Protein kinase domain profile. 340 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00224 658 Gene3D Transferase(Phosphotransferase) domain 1 416 620 - -
Car05g00224 658 SMART serkin_6 340 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00224 658 ProSiteProfiles Gnk2-homologous domain profile. 29 133 IPR002902 -
Car05g00224 658 Coils Coil 157 177 - -
Car05g00224 658 Pfam Protein tyrosine and serine/threonine kinase 345 608 IPR001245 GO:0004672|GO:0006468
Car05g00224 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Car05g00224 658 SUPERFAMILY Protein kinase-like (PK-like) 324 628 IPR011009 -
Car05g00224 658 ProSiteProfiles Gnk2-homologous domain profile. 139 247 IPR002902 -
Car05g00224 658 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 655 - -
Car05g00224 658 PANTHER PROTEIN KINASE DOMAIN 20 655 - -
Car05g00224 658 Gene3D - 29 133 IPR038408 -
Car05g00224 658 Gene3D - 142 247 IPR038408 -
Car05g00224 658 Pfam Salt stress response/antifungal 35 130 IPR002902 -
Car05g00224 658 Pfam Salt stress response/antifungal 161 245 IPR002902 -
Car05g00224 658 CDD STKc_IRAK 346 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00224 Car-Chr5 5380517 5387052 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00224 9 658 Receptor kinase-like Gene Family AT4G05200 42.097 0.0 529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car05g00224 PK_Tyr_Ser-Thr 3.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00224 - - ahf:112718031 904.82