Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00217 ATGGCTGCAACTTTGGTTGGAGGGGCTTTTCTCTCTGCAACTGTTCAAACCTTAGTTGAGAAACTTGCCTCAACTGAATTTCGTGATTACATCAAAAACACCAAGCTGAATGAGTCGTTGTTGGCAGAGTTGAAAACAACACTACTCGCTCTTCAAGCTGTGCTGGATGATGCAGAGATGAAGCAGATCACCAACACTGCTGTCGAAACATGGTTAGATGAATTGAAAGATGCAATCTTTGATGCTGAGGATTTGCTCAACCAAATCAATTACGATGCCCTGCGGTGCAAGATGGAGGGCAAACAAGGTGAAAACATTACTGGTCAGGTATGGAACCTCATTTCATCTCCATTTAAAAACATCTACGCAGAGATCAATTTACAAATGAAGATTATGTGTCAAAGGCTGCAGCTTTTTGCTCAGCAGAGAAACATCCTTGGCTTGCAAACTGTGAGCGGGAGAGTTTCTCGTAGAACGCCTTCGAGTTCAATGGTAAATGAATCTTTTATGGTTGGTAGGAAGGATGATAAAGAGGAACTAATTAGTATGTTGTTATCACACAGTGACACAAATAGTAATAATATTGGTGTTGTGGCAATTTGGGGCATGGGGGGTGTTGGCAAAACAACCCTTGCCCAACTTCTTTACAATGATAAAAAAGTACAAGAACATTTTGATCTGAAAGTCTGGGTTTGTGTGTCGGAGGATTTCAATATTTTGAGAGTAACTAAATCGTTGCTTGAATCTATCACTTCACGAGGCAGTGAAAGCACTAATCTTGATTTTCTTCGACGTGAATTAAATAAAAACTTGAGTGATAAAAGATTTTTGTTAGTGCTGGACGACCTTTGGAATGACAATTATAATGATTGGGATGAACTAGTAACTCCTTTGGTTAACGGAAAAATTGGAAGTAGGGTCATCATCACAACACGCCACCAAAAAGTTGCTGAGGTTGCACACACATTCCCCATTCATAAAGTAGAGACGTTATCAGATGATGATTGTTGGTCTTTACTCTCAAAGCATGCATTCAGAAGTGAAAACTGTCAAAGCAACGAATCCCCAAATCTAGAAGCAATTGGCAAGAAGATTGCAAAAAAGTGCGGTGGATTGCCCATAGCTGCTAAAACACTCGGAGGACTTTTGCGTTCAAAAGTAGATGCAAAAGAGTGGGCTGAAATTCTAAACAGTGACATATGGAAATTAACAAAGGATAATATTTCGCCTGCTTTGCGTTTGAGTTATCAAGATCTCCCCTCTCATTTGAAAAGATGTTTTGCCTATTGCTCAATTTTTCCGAAGGATTTTCCATTTGATAGGAAGCAATTGGTTTTGTTGTGGATGGCAGAAGGCTTCCTAGACCATTCTCTAGAAAATAAAACACCTGAAGAAGTAGGCGACGACTACGTCAATGAATTGTTGTCCAGATCCTTAATTCAAGTACAACAATCAAACGGTAATTTTGGAAGACAAAAGCTTGTTATGCACGACCTTGTTAATGATTTAGCCTCAATGGTATCTGGAAAAAGTTATTTCAGGCTTGAATGTAGTAGTAAAATCTCTAAAAATGTTCGTCATTTGTCATATAATCAAGAACTTTTCGACATTTTCAAAAAGTTTGAAGTTCTGGACAATTTCAAATGCTTGCGAAGCTTCCTACCCATTAACCTTTTCGACTTTCATGGTTATTACTTATCTAGAAAGGTTGTTGAAGATTTGCTACCCAAACTCATAAGGTTACGTGTGCTGTCCTTAAATAGTTATCGAAACATAACCACGCTACCAGAATCAATTGGCAGTATGGTGCTGTTGCAATATCTAGATCTCTCATTCACTGGAATCAAAAGTTTGCCTGATGCAATTTGTAAACTTTACAATTTGCAAACCTTGAATTTAATGGGGTGCAAGGATCTTACTGAGTTGCCACTATGTTTCGGACAGTTGATTAACTTACGTCACTTGGATATTAGTGAGACGAACATAAATGAGATGCCAAAGCAAATTGTTGGACTAGAAAACCTTCAGACATTAACTGTTTTTGTAGTTGGCAAGCAAGAAATTGGGTTAAGTGTCAAAGATCTTGGGAAGTTTCCTAACCTACAAGGAAAGCTTTGCATCAAGAACCTGCATAATGTCATCGACGCCGTTGACGCTAGTGATGCCAACATGAGAAGCAAAGAACATATTGAGGAGTTAGAGTTACAATGGAGCAAGCAAACTGAAGACTCGCGAATGGAGAAAGATGTGCTTGATATGTTGAAACCGTCACTAAATCTCAATAAACTGAGCATTGACCTATATGGAGGCACAAGCTTTCCGAGTTGGTTGGGAGATTCTTCTTTTTCAAACATGGTGTCCTTGTGCATGTCTAATTGTGAATATTGCATAACAGTTCCACCACTAGGACAACTACCTTCTCTCAAGGACTTGACTATTAGTGGTATGAAAATGGAAATAATTGGGATAGAATTCTATGGGATGACATTAGAACCTTCCATTTCTTCATTCCAACCATTTCGATCTCTCGAGAAACTGAATTTTGATTGCATGCCGAATTGGAAGGAATGGATACACTATGAAAGTGGTGAAGTTGCTTTCCCTCGTCTTAGAACTTTGTCGTTAAGGCAATGTCCAAAACTAATGGGACATATGCCTAACCATCTTTCTTCAATAGATGAAGTTAGCATAACTTGTTGTGATAGTCTCTTGACAACACCGCATACTACTTTACATTGGGTCTCCTCATTAAAAAAAATAAGTATTCAAAAAGATCAAAATTCTCTAATGGTTTCTAAAAGGACCCAATGGTTGTTACCTGAGAATGATTCTCCATGTCTACTACAGAGTTTACACCTTTGTAACTATGATACACTATTTTCATTACCTAAAATGATTATGAGCAGCAATTGTCTTCAATCCTTGGTACTCGATAATATTCCGTCTCTTGCTGCTTTTCCAACAGATGGTCTACCCACTTCATTGCAAACGCTTTCTATTTATAATTGTGAGAATTTAGCATTCTTGCCTCTTGAAACATGGGGCAATTACACATCGCTTGTGAATTTGCATTTATCGAAAAGTTGTAATTCACTTACCTCATTCGCATTGGATGGTTTCCCAACACTCCAAAACCTTCATATTGATTCCTGTACAAATTTGGAATCCATTTTTATTTCAAAAACATCTTTGCTTCTTCCGTCATCTTTGACTCCACGGATGGAAACTCTAACCTCTCTAGAAATTTTGCATCTCGCAAATCTTCCAAAACTATCATTTTGTGAAGGAGCTTGCCTACCTCCCAAATTACTAGGTATTTATATTGTATCAGTGAGAATAACAACACCTATATTTGAATGGGGTCTCCAACGCCTTACTGCTCTTTCAACATTGTATATTGGAAGTGATGATGATATTGTTAACACCTTGTTGAAGGAGAAATTGTTGCCTATTTCCCTTATGGATCTATTTATCTGTGGTCTCCCTGAAATGAAATCCTTTGAAGGAAATGGACTTCGACACCTTTCCTCTTTAGAAGGACTTTGGTTTAATGATTGTCCAAGGCTTGAGTATTTGTTAGAAGACACATTGCCTTCCTCTCTTAAGATACTGAAAATTAAGAAATGCCCTCTATTAGAA 3639 0.3803 MAATLVGGAFLSATVQTLVEKLASTEFRDYIKNTKLNESLLAELKTTLLALQAVLDDAEMKQITNTAVETWLDELKDAIFDAEDLLNQINYDALRCKMEGKQGENITGQVWNLISSPFKNIYAEINLQMKIMCQRLQLFAQQRNILGLQTVSGRVSRRTPSSSMVNESFMVGRKDDKEELISMLLSHSDTNSNNIGVVAIWGMGGVGKTTLAQLLYNDKKVQEHFDLKVWVCVSEDFNILRVTKSLLESITSRGSESTNLDFLRRELNKNLSDKRFLLVLDDLWNDNYNDWDELVTPLVNGKIGSRVIITTRHQKVAEVAHTFPIHKVETLSDDDCWSLLSKHAFRSENCQSNESPNLEAIGKKIAKKCGGLPIAAKTLGGLLRSKVDAKEWAEILNSDIWKLTKDNISPALRLSYQDLPSHLKRCFAYCSIFPKDFPFDRKQLVLLWMAEGFLDHSLENKTPEEVGDDYVNELLSRSLIQVQQSNGNFGRQKLVMHDLVNDLASMVSGKSYFRLECSSKISKNVRHLSYNQELFDIFKKFEVLDNFKCLRSFLPINLFDFHGYYLSRKVVEDLLPKLIRLRVLSLNSYRNITTLPESIGSMVLLQYLDLSFTGIKSLPDAICKLYNLQTLNLMGCKDLTELPLCFGQLINLRHLDISETNINEMPKQIVGLENLQTLTVFVVGKQEIGLSVKDLGKFPNLQGKLCIKNLHNVIDAVDASDANMRSKEHIEELELQWSKQTEDSRMEKDVLDMLKPSLNLNKLSIDLYGGTSFPSWLGDSSFSNMVSLCMSNCEYCITVPPLGQLPSLKDLTISGMKMEIIGIEFYGMTLEPSISSFQPFRSLEKLNFDCMPNWKEWIHYESGEVAFPRLRTLSLRQCPKLMGHMPNHLSSIDEVSITCCDSLLTTPHTTLHWVSSLKKISIQKDQNSLMVSKRTQWLLPENDSPCLLQSLHLCNYDTLFSLPKMIMSSNCLQSLVLDNIPSLAAFPTDGLPTSLQTLSIYNCENLAFLPLETWGNYTSLVNLHLSKSCNSLTSFALDGFPTLQNLHIDSCTNLESIFISKTSLLLPSSLTPRMETLTSLEILHLANLPKLSFCEGACLPPKLLGIYIVSVRITTPIFEWGLQRLTALSTLYIGSDDDIVNTLLKEKLLPISLMDLFICGLPEMKSFEGNGLRHLSSLEGLWFNDCPRLEYLLEDTLPSSLKILKIKKCPLLE 1213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00217 1213 Pfam Rx N-terminal domain 10 102 IPR041118 -
Car05g00217 1213 CDD AAA 171 283 - -
Car05g00217 1213 PRINTS Disease resistance protein signature 197 212 - -
Car05g00217 1213 PRINTS Disease resistance protein signature 369 383 - -
Car05g00217 1213 PRINTS Disease resistance protein signature 270 284 - -
Car05g00217 1213 PRINTS Disease resistance protein signature 623 639 - -
Car05g00217 1213 Coils Coil 41 61 - -
Car05g00217 1213 Gene3D - 330 420 IPR042197 -
Car05g00217 1213 Gene3D Ribonuclease Inhibitor 949 1213 IPR032675 -
Car05g00217 1213 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 430 IPR027417 -
Car05g00217 1213 PANTHER - 50 1016 - -
Car05g00217 1213 Gene3D Ribonuclease Inhibitor 542 937 IPR032675 -
Car05g00217 1213 Gene3D - 13 129 - -
Car05g00217 1213 SUPERFAMILY L domain-like 495 920 - -
Car05g00217 1213 Gene3D - 154 323 IPR027417 -
Car05g00217 1213 PANTHER DISEASE RESISTANCE PROTEIN RP 50 1016 IPR044974 GO:0006952
Car05g00217 1213 Pfam NB-ARC domain 175 398 IPR002182 GO:0043531
Car05g00217 1213 Gene3D - 421 505 IPR036388 -
Car05g00217 1213 SUPERFAMILY L domain-like 939 1212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00217 Car-Chr5 5267121 5270759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00217 194 692 WRKY Transcription Factor Family AT5G45050 22.638 1.67e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00217 - - mtr:MTR_3g032370 1439.48