Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00214 ATGCAAGCAGACGAGGATGTTGGAAAGATAGCACTTGCAGTTCCTGTTTTAGTTTCAAAGGCTCTGGAATTATTTTTGCAAGATCTTTGTGACCGCACTTATGAAATAACTCTTCAGAGAGGAGCAAAGACCATGAACGCATTGCATTTGAAACATTGTGTACAAAGCTACAATGTCTTCGACTTTTTGAGAGACATCGTTGGTAGGGTTCCTGACTATGGGCATGGCCATAGCCATTCTGAGGCTGGGGCTGATGATCGCGCCGTTCCAAAGAGAAGGAAAGCGGCTGCTGGGGATGATGGCAATGACAGTGATGAAGAGACTAAGCGGAGTAAGATGCTTGAGTTGAGCCACACTGGTGGTACTggtaggggaagaggaaggggtagaggaagaggTCGCGGTCGAGGGGCTCGAACCGCAGAAAAAGAGACCTTCCATCAGCAGGTTGAATCTGAACCATGCACATCTATTCAGCAAAGTAGCAAAGAAGTCCCTGATGCATCCATGGCAATAGATAATGTCCCAGAACAAAAGGACTTACCGAAGGAGAATAATAATGCAGTTCATGAGGAAAGTACTCAATCACTCCGAAACATTGATCTGAATGCCAACTTACATGAAAATGAAGACAAACTCAATACAGACACAACTATTACTCAGGCCTCATTGCCTGAACCTGCTGCAACAACAACAACGGATATGCAACACGAAGAAATTCCAGGCTGGTCCCTTTCCGATGTGGACAAGATGGCGATCGACACTTTGCAGCTTGCAGCAAACATTAATAGTAGGATAGAAGAGGATGAGGAAGATTATGATGAAGAAGAAGGGTAA 837 0.4289 MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNALHLKHCVQSYNVFDFLRDIVGRVPDYGHGHSHSEAGADDRAVPKRRKAAAGDDGNDSDEETKRSKMLELSHTGGTGRGRGRGRGRGRGRGARTAEKETFHQQVESEPCTSIQQSSKEVPDASMAIDNVPEQKDLPKENNNAVHEESTQSLRNIDLNANLHENEDKLNTDTTITQASLPEPAATTTTDMQHEEIPGWSLSDVDKMAIDTLQLAANINSRIEEDEEDYDEEEG 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00214 278 MobiDBLite consensus disorder prediction 215 241 - -
Car05g00214 278 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 276 - -
Car05g00214 278 MobiDBLite consensus disorder prediction 135 149 - -
Car05g00214 278 MobiDBLite consensus disorder prediction 75 114 - -
Car05g00214 278 MobiDBLite consensus disorder prediction 150 166 - -
Car05g00214 278 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 1 54 IPR003958 -
Car05g00214 278 SUPERFAMILY Histone-fold 1 70 IPR009072 GO:0046982
Car05g00214 278 Gene3D Histone, subunit A 1 69 IPR009072 GO:0046982
Car05g00214 278 MobiDBLite consensus disorder prediction 215 239 - -
Car05g00214 278 PANTHER HISTONE SUPERFAMILY PROTEIN 1 276 - -
Car05g00214 278 Coils Coil 259 278 - -
Car05g00214 278 MobiDBLite consensus disorder prediction 75 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00214 Car-Chr5 5224720 5228489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00214 1 266 CCAAT-HAP5 Transcription Factor Family AT3G12480 47.312 7.69e-60 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Car05g00214 CBFD_NFYB_HMF 1.4e-12 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00214 K21752 - gmx:100810093 367.466