Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00210 ATGGGCATTGAAAAGCTCAAATCTTTTGCAAGCTTCCTTGATAAATCTATGCCCTACATTGCCATGATTCTTCTACAATTTGGCTATGCAGGCGTGAACATTATAACCAAGCTTTCTCTCAATGGAGGCATGAGTCACTATGTTCTTGTTGTTTATCGCCACGCTTTTGCAACTATTGCTATAGCTCCATTTGCCATTATCTTTGAAAGGAAGGCTCAACCAAAGGTTACATTTCAAATTTTCTTCCAAATTTTTCTCCTAGCTGTGCTTGGGCCAGTGATAGATCAAAACTTCTACTATGCTGGACTGAAATTAACATCCCCAACCTTCTCATGTGCAATGAGCAATATGCTTCCAGCCATGACATTTTTAATGGCGGTTTTATGCCGGATGGAAAAGATCAATATGAAGAAGTTAATATGCCAAGCAAAGTTGGTGGGAACTATATTAACTGTGGCTGGGGTAATGTTGATGAGCTTTTACAAAGGCCCAATTGTGGAGTTATTGTGGACTAAAGATATATCTCATAGTAATTCCAATGCAACAAACAACACAAGATCCTCAAGCAAGAATGATTGGCTCTTAGGCTCAATTTTTCTAACTATTTCTACCATTGCTTGGGCATCCTTCTTTGTGTTACAAGCTAAAGCTTTAGAAACATACAAGAATCATCAACTAACACTCACATCACTTATATGTTTCATTGGCACGCTTCTAGCTTTTGCTACCACAATGGTGATGGAACACAAGACTTCTGTGTGGACAATTGGATGGGATATGAATTTATTGGCTTCTGCCTATAGTGGAATTGTTTCATCAAGTATATCATACTACGTACAAGGGTTGGTAATAAAAAAGAAAGGGCCTGTTTTTGCAACTTCATTTAGCCCTTTGATGATGATCATTGTAGCCATCATGGGCTCCTTTATCCTTGCAGAGAAGATTTTTCTTGGAAGTGTGATTGGTTCCATCTTGGTTGTCATAGGCTTATATTCTGTTTTGTGGGGAAAGCACAAAGAACAAGTGAATAATAGAGTGGTAGATGATAATTCCTCACCTATAAAAGGTGCTCGAGTAAATGGAAGTATTATGACACCTATTGAATCCATTGATCAACTTTGTGAAGTAAAATCTGATCAGAAAGTAGAATCAAACATTTCTCTAGTTATTGTTACAACACATGTTaataaccaataa 1197 0.3718 MGIEKLKSFASFLDKSMPYIAMILLQFGYAGVNIITKLSLNGGMSHYVLVVYRHAFATIAIAPFAIIFERKAQPKVTFQIFFQIFLLAVLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFLMAVLCRMEKINMKKLICQAKLVGTILTVAGVMLMSFYKGPIVELLWTKDISHSNSNATNNTRSSSKNDWLLGSIFLTISTIAWASFFVLQAKALETYKNHQLTLTSLICFIGTLLAFATTMVMEHKTSVWTIGWDMNLLASAYSGIVSSSISYYVQGLVIKKKGPVFATSFSPLMMIIVAIMGSFILAEKIFLGSVIGSILVVIGLYSVLWGKHKEQVNNRVVDDNSSPIKGARVNGSIMTPIESIDQLCEVKSDQKVESNISLVIVTTHVNNQ 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00210 398 Pfam EamA-like transporter family 18 159 IPR000620 GO:0016020|GO:0016021
Car05g00210 398 Pfam EamA-like transporter family 195 334 IPR000620 GO:0016020|GO:0016021
Car05g00210 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
Car05g00210 398 PANTHER WAT1-RELATED PROTEIN 12 372 IPR030184 GO:0016021|GO:0022857
Car05g00210 398 PANTHER WAT1-RELATED PROTEIN 12 372 - -
Car05g00210 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00210 Car-Chr5 5176483 5183814 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00210 1 364 Nodulin-like Gene Family AT5G07050 67.647 1.32e-178 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00210 - - gmx:100799947 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00210 05 5176483 5183814 Car05g00210 05 5176483 5183814 ECH