Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00204 ATCACAAATTCTAGCTGTTGCTGCTAGCTACTTAATAGCATTGTTGGGATTATTACCAGTCAAGACTTTGAGGTTTATTGTCGGAAAATCCCTTGGGAAGTCATGGTCTGCCAATGCAGTTGAGGCTGCATGCTCTCACTTGTCACAAGTTAGCTTTACTGTTGAAAGAAGGGCTTCGATGTTAGGTCACAATAAGCATAAACTGACCGGGGGAACTATTGCTGAGACTAGGGCAGCAACCACCAACTGGGGACACCAGCCAAGTAAACAAGAAGCTGAGAAAATGATGAGAGAATCCACCTTGGATAGACTTTCTTCTTTAATCAGAAATCATGAGAAGAAACTAGCTCTGGGTGATTTGGAACCAGCAGACCTTCCATCTTATTTGGAGACATTAACTAATGAAGAGAGATTTTTGTTTAGGAAGATTGGTCTGAGTATGAAGCCATATTTACTTCTAGGGAGGCGAGATGTTTATGCTGGCACCATAGAAAACATGCATCTACACTGGAAATATCGAGAGGTCGTAAAGATAATTGTGAAAGGGAAAATATCTACACATGCATCTACTTCCATCTGCAGCATTTTGGACTATGATGTGCTTAACTTGGAAGTGCCAACACTTCCTATTGTTGGATCATTGATAAAATCTGGAGTTAGAGCTCTAATTTACAGGTCAACCGCGTCGACACTTACTAACAACTGGATGGAGTACTTTGTGACTTCCAAAAGATTAGTTGCTGGAGATACTTTTGTGTTTCTGAGAGGAAACAATGGAGAATTACGCGTTGTAGTGAGGCATCTCGCTTTGCCTCAGAGCTGCATGCCTTTATCTGTGATTTCTGGTCAGAGCATGCACCTTGGAGTCCTTGCAACTGTATCTCATGTTGTTGCAACCCCAGATTTTGTTGTCGACTACTTTGTTGATATTAGCGTCGGCCATCCTATGCACCTATTTTCTCAACTGACGTGTCAACTGACATATTTAGCGTCGGATGTCTTGATTTTGCTGATAGCGTCGGTGTAG 1027 0.4206 SQILAVAASYLIALLGLLPVKTLRFIVGKSLGKSWSANAVEAACSHLSQVSFTVERRASMLGHNKHKLTGGTIAETRAATTNWGHQPSKQEAEKMMRESTLDRLSSLIRNHEKKLALGDLEPADLPSYLETLTNEERFLFRKIGLSMKPYLLLGRRDVYAGTIENMHLHWKYREVVKIIVKGKISTHASTSICSILDYDVLNLEVPTLPIVGSLIKSGVRALIYRSTASTLTNNWMEYFVTSKRLVAGDTFVFLRGNNGELRVVVRHLALPQSCMPLSVISGQSMHLGVLATVSHVVATPDFVVDYFVDISVGHPMHLFSQLTCQLTYLASDVLILLIASV 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00204 341 Pfam CRS1 / YhbY (CRM) domain 132 186 IPR001890 GO:0003723
Car05g00204 341 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 63 185 - -
Car05g00204 341 SMART CRS1_YhbY_2 132 225 IPR001890 GO:0003723
Car05g00204 341 ProSiteProfiles CRM domain profile. 130 236 IPR001890 GO:0003723
Car05g00204 341 SUPERFAMILY DNA-binding pseudobarrel domain 228 268 IPR015300 -
Car05g00204 341 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 63 185 IPR045278 GO:0000375|GO:0003729
Car05g00204 341 Gene3D - 131 202 IPR035920 -
Car05g00204 341 Gene3D - 217 268 IPR015300 -
Car05g00204 341 SUPERFAMILY YhbY-like 131 183 IPR035920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00204 Car-Chr5 4982647 4984922 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00204 231 311 B3 DNA Binding Superfamily AT3G61830 68.293 8.09e-23 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00204 - - gmx:100808024 191.045