Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00194 ATGGCTGCAACTTTGGTTGGAGGGGCTTTTCTCTCTGCAACTGTTCAAACCTTAGTTGAGAAACTTGCCTCAACTGAATTTCGTGATTACATCAAAAACACCAAGCTGAATGAGTCGTTGTTGGCAGAGTTGAAAACAACACTACTCGCTCTTCAAGCTGTGCTGGATGATGCAGAGATGAAGCAGATCACCAACACTGCTGTCGAAACATGGTTAGATGAATTGAAAGATGCAATCTTTGATGCTGAGGATTTGCTCAACCAAATCAATTACGATGCCCTGCGGTGCAAGATGGAGGGCAAACAAGGTGAAAACATTACTGGTCAGGTATGGAACCTCATTTCATCTCCATTTAAAAACATCTACGCAGAGATCAATTCACAAATGAAGATTATGTGTCAAAGGCTGCAACTTTTTGCTCAACAGAGAAACGTCCTTGGCTTGCAAATTGTGAGCAGGAGAGTTTCTCGTAGAACGCCTTCGAGTTCAATGGTAAATGAATCTTTTATGGTTGGTAGGAAGGATGATAAAGAGGAACTAATTAGTATGTTATTATCACACAGTGACACAAATAGTAATAATTTTGGTGTTGTGGCAATTTGGGGCATGGGGGGTGTTGGCAAAACAACCCTTGCCCAACTTCTTTACAATGATAAAAAAGTACAAGAACATTTTGATCTGAAAGTCTGGGTTTGTGTGTCGGAGGATTTCAATATTTTGAGAGTAACTAAATCGTTGCTTGAATCTATCACTTCACGAGGCAGTGAAAGCACTAATCTTGATTTTCTTCGACGTGAATTAAATAAAAACTTGAGTGATAAAAGATTTTTGTTAGTGCTGGACGACCTTTGGAATGACAATTATAATGATTGGGATGAACTAGTAACTCCTTTGGTTAACGGAAAAATTGGAAGTAGGGTCATCATCACAACACGCCACCAAAAAGTTGCTGAGGTTGCACACACATTCCCCATTCATAAAGTAGAGACGTTATCAGATGATGATTGTTGGTCTTTACTCTCAAAGCATGCATTCAGAAGTGAAAACTGTCAAAGCAACGAATCCCCAAATCTAGAAGCAATTGGCAAGAAGATTGCAAAAAAGTGCGGTGGATTGCCCATAGCTGCTAAAACACTCGGAGGACTTTTGCGTTCAAAAGTAGATGCAAAAGAGTGGGCTGAAATTCTAAACAGTGACATATGGAAATTAACAAAGGATAATATTTTGCCTGCTTTGCGTTTGAGTTATCAAGATCTCCCCTCTCATTTGAAAAGATGTTTTGCCTATTGCTCAATTTTTCCGAAGGATTTTCCATTTGATAGGAAGCAATTGGTTTTGTTGTGGATGGCAGAAGGCTTCCTAGACCATTCTCTAGAAAATAAAACACCTGAAGAAGTAGGCGACGACTACGTCAATGAATTGTTGTCCAGATCCTTAATTCAAGTACAACAATCAAACGGTGATTTTGGAAGACAAAAGCTTGTTATGCACGACCTTGTTAATGATTTAGCCTCAATGGTATTTGGAAAAAGTTATTTCAGGCTTGAATGTAGTGGTAAAATCTCTAAAAATGTTCGTCATTTGTCATATAATCAAGAATTTTACGACATTTTCAAAAAGTTTGAAGTTCTCGACAATTTCAAATGCTTGCGAAGCTTCCTACCCGTTAAGCTTTCCCGCTTTCATGGTTATTACTTATCTAGAAAGGTTGTTGAAGATTTACTACCCAAACTCATAAGGTTACGTGTGCTGTCCTTAAATAAGTATTCGAACATAACCACGCTACCAGAATCAATTGGCAGTATGGTGCAGTTGCAATATCTAGATCTCTCATTCACTGGAATCAAAAGCTTGCCTGATGCAATTTGTAAACTTTACAATTTGCAAACCTTGAATTTAATGGGGTGCATGGATCTTACTGAGTTGCCACTATGTTTCGGACAGTTGATTAACTTACGTCACTTGGATATTAGTGAGACAAACATAAATGAGATGCCAAAGCAAATTGTTGGACTAGAAAACCTTCAGACATTAACTGTTTTTGTAGTTGGCAAGCAAGAAATTGGGTTAAGTGTCAAAGATCTTGGGAAGTTTCCTAACCTACAAGGAAAGCTTTGCATCAAGAACCTGCATAATGTCATCGACGCCGTTGACGCTAGTGATGCCAACATGAGAAGCAAAGAACATATTGAGGAGTTAGAGTTACAATGGAGCAAGCAAACTGAAGACTCGCGAATGGAGAAAGATGTGCTTGATATGTTGAAACCGTCACTAAATCTCAATAAACTGAGCATTGACCTATATGGAGGCACAAGCTTTCCGAGTTGGTTGGGAGATTCTTCTTTTTCAAACATGGTGTCCTTGTGCATGTCTAATTGTGAATATTGCATAACAGTTCCACCACTAGGACAACTACCTTCTCTCAAGGACTTGACCATTAGTGGTATGAAAATGGAAATAATTGGGATAGAATTCTATGGGATGACATTAGAACCTTCCATTTCTTCATTCCAACCATTTCGATCTCTCGAGAAACTGTATTTTGTTTGCATGCCGAATTGGAAGGAATGGATACACTATGAAAGTGGTGAAGTTGCTTTCCCTCGTCTTAGAACTTTGTCGTTAAGGCAATGTCCAAAACTAATGGGACATATGCCTAACCATCTTTCTTCAATAGATGAAGTTAGCATAACTTGTTGTGATAGTCTCTTGACAACACCGCATACTACTTTACATTGGGTCTCCTCATTAAAAAAAATAAGTATTAAAAAAGATCAAAATTCTCTAATGGTTTCTAAAAGGACCCAATTGTTGTCACCTGTGAGTGAAAGGACCCAATGGTTGTTACCTGAGAATGATTCTCCATGTCTACTACAGAGTTTATGTATTCGTTACTATGATACACTATTTTCATTACCTAAAATGATTATGAGCAGCAATTGTCTTCAATCCTTGGTACTCGATAATATTCCGTCTCTTGCTGCTTTTCCCACAGATGGTCTACCCACTTCATTGCAAACGCTTTCTATTTATAATTGTGAGAATTTAGCATTCTTGCCTCTTGAAACATGGGGCAATTACACATCGCTTGAGAATTTGCTTTTAGCGAAAAGTTGTAATTCACTTACCTCATTCGCATTGGATGGTTTCCCAAAACTCCAAATCCTTCATATTGATTCCTGTACAAATTTGGAATCCATTTTTATTTCAAAAACATCTTTTCTTCTTCCGTCATCTTTGACTCCACGGATGGAAACTCTAACCTCTCTAGAAATTTTGCATCTCGCAAATCTTCCAAAACTATCATTTTGTGAAGGAGCTTGCCTACCTCCCAAATTACTATATATTCGTATTATATCAGTGAGAATAACAACACCTATATTTGAATGGGGTCTCCAACGCCTTACTGCTCTTTCAACATTGCATATTGGAAGTGATGATGATATTGTTAACACCTTGTTGAAGGAGAAATTGTTGCCTATTTCCCTTACGGGTCTATGTATCTGTGATCTCCCTGAAATGAAATCCTTTGAAGGAAATGGACTTCGACACCTTTCCTCTTTAGAAGCACTTTGCTTTAAAGATTGTCCAAGGCTTGAGTATTTGTCAGAAGAAACATTGCCTTCCTCTCTTAAGATGCTGGAAATCGTGAAATGCCCTCTATTAAAAGCAAGGTATAAAAGTCAGAGGTGGGAGCATCTGTCCATCCCAGTCTTACGTATAAATGATGAAGTGATAATATGA 3744 0.3819 MAATLVGGAFLSATVQTLVEKLASTEFRDYIKNTKLNESLLAELKTTLLALQAVLDDAEMKQITNTAVETWLDELKDAIFDAEDLLNQINYDALRCKMEGKQGENITGQVWNLISSPFKNIYAEINSQMKIMCQRLQLFAQQRNVLGLQIVSRRVSRRTPSSSMVNESFMVGRKDDKEELISMLLSHSDTNSNNFGVVAIWGMGGVGKTTLAQLLYNDKKVQEHFDLKVWVCVSEDFNILRVTKSLLESITSRGSESTNLDFLRRELNKNLSDKRFLLVLDDLWNDNYNDWDELVTPLVNGKIGSRVIITTRHQKVAEVAHTFPIHKVETLSDDDCWSLLSKHAFRSENCQSNESPNLEAIGKKIAKKCGGLPIAAKTLGGLLRSKVDAKEWAEILNSDIWKLTKDNILPALRLSYQDLPSHLKRCFAYCSIFPKDFPFDRKQLVLLWMAEGFLDHSLENKTPEEVGDDYVNELLSRSLIQVQQSNGDFGRQKLVMHDLVNDLASMVFGKSYFRLECSGKISKNVRHLSYNQEFYDIFKKFEVLDNFKCLRSFLPVKLSRFHGYYLSRKVVEDLLPKLIRLRVLSLNKYSNITTLPESIGSMVQLQYLDLSFTGIKSLPDAICKLYNLQTLNLMGCMDLTELPLCFGQLINLRHLDISETNINEMPKQIVGLENLQTLTVFVVGKQEIGLSVKDLGKFPNLQGKLCIKNLHNVIDAVDASDANMRSKEHIEELELQWSKQTEDSRMEKDVLDMLKPSLNLNKLSIDLYGGTSFPSWLGDSSFSNMVSLCMSNCEYCITVPPLGQLPSLKDLTISGMKMEIIGIEFYGMTLEPSISSFQPFRSLEKLYFVCMPNWKEWIHYESGEVAFPRLRTLSLRQCPKLMGHMPNHLSSIDEVSITCCDSLLTTPHTTLHWVSSLKKISIKKDQNSLMVSKRTQLLSPVSERTQWLLPENDSPCLLQSLCIRYYDTLFSLPKMIMSSNCLQSLVLDNIPSLAAFPTDGLPTSLQTLSIYNCENLAFLPLETWGNYTSLENLLLAKSCNSLTSFALDGFPKLQILHIDSCTNLESIFISKTSFLLPSSLTPRMETLTSLEILHLANLPKLSFCEGACLPPKLLYIRIISVRITTPIFEWGLQRLTALSTLHIGSDDDIVNTLLKEKLLPISLTGLCICDLPEMKSFEGNGLRHLSSLEALCFKDCPRLEYLSEETLPSSLKMLEIVKCPLLKARYKSQRWEHLSIPVLRINDEVII 1247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00194 1247 CDD AAA 171 283 - -
Car05g00194 1247 Coils Coil 41 61 - -
Car05g00194 1247 Gene3D Ribonuclease Inhibitor 957 1242 IPR032675 -
Car05g00194 1247 Gene3D - 13 135 - -
Car05g00194 1247 SUPERFAMILY L domain-like 949 1224 - -
Car05g00194 1247 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 430 IPR027417 -
Car05g00194 1247 SUPERFAMILY L domain-like 495 922 - -
Car05g00194 1247 Pfam Rx N-terminal domain 10 102 IPR041118 -
Car05g00194 1247 Gene3D - 152 323 IPR027417 -
Car05g00194 1247 PANTHER - 50 1028 - -
Car05g00194 1247 PRINTS Disease resistance protein signature 197 212 - -
Car05g00194 1247 PRINTS Disease resistance protein signature 270 284 - -
Car05g00194 1247 PRINTS Disease resistance protein signature 369 383 - -
Car05g00194 1247 PRINTS Disease resistance protein signature 623 639 - -
Car05g00194 1247 SMART LRR_typ_2 602 625 IPR003591 -
Car05g00194 1247 SMART LRR_typ_2 649 672 IPR003591 -
Car05g00194 1247 Pfam NB-ARC domain 174 397 IPR002182 GO:0043531
Car05g00194 1247 PANTHER DISEASE RESISTANCE PROTEIN RP 50 1028 IPR044974 GO:0006952
Car05g00194 1247 Gene3D - 421 505 IPR036388 -
Car05g00194 1247 Gene3D Ribonuclease Inhibitor 539 937 IPR032675 -
Car05g00194 1247 Gene3D - 330 420 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00194 Car-Chr5 4699933 4704721 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00194 198 692 WRKY Transcription Factor Family AT5G45050 22.679 3.79e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00194 - - mtr:MTR_3g032370 1449.11