Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00192 ATGAGTAAAGAAACACAAAAAGTAGTGGTGATCCAAGATGCATCAAGAGATGTTGGTTTAAAGGCTATAGAAAAGGCCCTCAAAAAGTTATCTGTTAAAGCTGGAGATCAGCTTATAATTGTTGCCATTCTTAATTGGTTTAGCAGTCCTAGTATGTTTTCTTTCTTTGGAAGAAAAAGTTTGGGTTATATGGTCTCAGTTGATTCAACTTATTTTGTTTCATCAAACAAGAAAATCATTGAAGAAAACTATACCAAGAGAAAGAATGATTATCATATGAATCGATATATCAACAAGCTCTCTGATTACTGTCAAATGAATGAGATTGAATTCCAACTAGAAGTGCTTGTTGGACCAGCTTCACAAGTCATTTCTGAGGCTGCAAGAAAATTTCAGCCTACAAGTTTGATACTTGATAGACAGATCCACAGAAACATGAAGAATTTCATGGACAGGATCCCTTGTGGTATGTATAGGATAACAAGTGACAACTCCATTGAAAAGTTGAAAGATCCAAAATCAGCAGCTACAAAATTTGCTGAAAAGCAAGAAAATATAAGTTATTCAGAAATGATACCAGGAAGTTCAGATGATGGAGTTTCTCTTCATATGTCCAAATCTTCATCTAATGTTGATCTTTCCGCGTCAACCGGAGTTTCAAGTCCATGGAGTACTGATGCATCTTCTTCTGTCATTGGAAGTTCACAATATGTCCTTCAAAAATACCAAGTTGGAGAGTTTTTTCCAAATATAGAACAAGAAAAACAAGGTTCACTATTTGATATTTCTGAAAATCAAGAAACAAGCCGAACAGAACTAAATCAAAAGGCGATACTAATCGACAATGAAGCGTATCATTTGGTGGAGGATGACTTTACAAATCCAGTTTGTTCTGTGTGCAATAACAGAAGACTGAAAATTGGATCAAAAAGAGACTTCAGTTATATAGAACTTTACACTGCTACACAAGGATTTTCTGCTAAGAACTTTTTGTCAGAAGGTGGATTTGGATCTGTTTACAAAGGACAATTGAATGGAATGACAATTGCTGTTAAGCAACATAAGAGTGCTAGCTTCCAAGGGGAGAAGGAATTTAAGTCTGAAGTGAATGTACTTAGAAAAGCAAGACATGAGAATGTGGTTATGCTAATAGGTTCATGTTCTGAAGGAAATAATAGGCTTCTTGTTTATGAATATGTATGCAATGGATCACTTGATCAACATCTATCAGAACACTCTAGATCACCTCTAACTTGGGAAGATAGGATCAAAGTAGCTATTGGAGCTGCCAGAGGCTTACTATACTTACACAAAAATAACATAGTACACAGAGATGTCAGACCAAACAATATCCTTGTAACACATGATCATCAACCATTGATAGGAGATTTTGGACTAGCAAGAACTCACAACAAAGATTTGACACACTCAACAGAAGTTGTTGGTACATGGGGGTATTTGGCACCAGAATATGCAGAATATGGCAAAGTTTCAAGTAGAACAGATGTATATTCTTTTGGAGTGGTTCTACTACAGCTTATAACTGGAATGAGAACTACAGACAAAAGACTTGGAGGAAGAAGCCTTGTGGGATGGGCAAGGCCACTTTTAAGAGAGAGAAACTATCCTGATCTAATTGATGAAAGGATCATTGATACTCATGATTATCATCAGTTATTTTGGATGGTACGGCTAGCTGAGAAATGTCTAAGCAGGGACCCTAAGAAAAGACTGAGTATGGTTGCGGTTGTTAATGCTTTGACTGACATTTCAGAAGGCAACACATGTGACCTTGTAACAGGAGATTACTCCCCTGCAAGGTCAGATTCATCTTATAGTGAATCAGAGTTTGATGAAAATGAAGATGAAATACAAGGACCCTTTGAGGAGGAAGGTGAGTTACAAATCCTCAATTCAGAATCTACAGAAATCAACAACATTATTACTCAAATGAGGCATATGATTGTGAGACAGCCACCATCTCCTCCATTTAAAAGCATCTATTCAAGTGGCTCTAGTTCATTTCAGTTTTCTGATGAGTCAAATAGTGATTGTGAAGCACATCATGAAACGAATAAAGAAATACCAAAACTTAAAGTGGCTTCACTCAACTCTTAA 2118 0.364 MSKETQKVVVIQDASRDVGLKAIEKALKKLSVKAGDQLIIVAILNWFSSPSMFSFFGRKSLGYMVSVDSTYFVSSNKKIIEENYTKRKNDYHMNRYINKLSDYCQMNEIEFQLEVLVGPASQVISEAARKFQPTSLILDRQIHRNMKNFMDRIPCGMYRITSDNSIEKLKDPKSAATKFAEKQENISYSEMIPGSSDDGVSLHMSKSSSNVDLSASTGVSSPWSTDASSSVIGSSQYVLQKYQVGEFFPNIEQEKQGSLFDISENQETSRTELNQKAILIDNEAYHLVEDDFTNPVCSVCNNRRLKIGSKRDFSYIELYTATQGFSAKNFLSEGGFGSVYKGQLNGMTIAVKQHKSASFQGEKEFKSEVNVLRKARHENVVMLIGSCSEGNNRLLVYEYVCNGSLDQHLSEHSRSPLTWEDRIKVAIGAARGLLYLHKNNIVHRDVRPNNILVTHDHQPLIGDFGLARTHNKDLTHSTEVVGTWGYLAPEYAEYGKVSSRTDVYSFGVVLLQLITGMRTTDKRLGGRSLVGWARPLLRERNYPDLIDERIIDTHDYHQLFWMVRLAEKCLSRDPKKRLSMVAVVNALTDISEGNTCDLVTGDYSPARSDSSYSESEFDENEDEIQGPFEEEGELQILNSESTEINNIITQMRHMIVRQPPSPPFKSIYSSGSSSFQFSDESNSDCEAHHETNKEIPKLKVASLNS 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00192 705 Pfam Protein tyrosine and serine/threonine kinase 328 586 IPR001245 GO:0004672|GO:0006468
Car05g00192 705 SUPERFAMILY Protein kinase-like (PK-like) 308 587 IPR011009 -
Car05g00192 705 ProSiteProfiles Protein kinase domain profile. 325 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00192 705 MobiDBLite consensus disorder prediction 682 696 - -
Car05g00192 705 MobiDBLite consensus disorder prediction 663 681 - -
Car05g00192 705 SMART tyrkin_6 325 587 IPR020635 GO:0004713|GO:0006468
Car05g00192 705 PANTHER OS01G0253100 PROTEIN 20 614 IPR045271 GO:0004714|GO:0006468
Car05g00192 705 ProSitePatterns Tyrosine protein kinases specific active-site signature. 441 453 IPR008266 GO:0004672|GO:0006468
Car05g00192 705 MobiDBLite consensus disorder prediction 599 624 - -
Car05g00192 705 Gene3D Phosphorylase Kinase; domain 1 297 399 - -
Car05g00192 705 Gene3D Transferase(Phosphotransferase) domain 1 400 602 - -
Car05g00192 705 MobiDBLite consensus disorder prediction 659 705 - -
Car05g00192 705 PANTHER TYROSINE KINASE FAMILY PROTEIN 20 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00192 Car-Chr5 4648251 4655795 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00192 313 602 Trihelix Transcription Factor Family AT1G70460 46.179 7.95e-79 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Car05g00192 PK_Tyr_Ser-Thr 7.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00192 - - gsj:114417376 902.508