Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00173 ATGGGGTCTCAAGTTGTTGGTGATAATAACGAAATGCATTCGCAACTCCAGCCATTGGCACGGCAAAACTCAATGTACAATCTTACACTCGATGAAGTTCAGAGTCAATTAGGCGACTTAGGAAAGCCGCTAAGTAGTATGAACCTTGATGAACTTCTGAAAAACGTATGGACTGTCGAGGCAAACCAATCCATTCATATGGACAATGAGAATGCAGCTCAAGCTGGTCAACTTGCTTTGCAGCGTCAACCTAATCTGTCGATAACCGGTCCATTAAGCAAGAAAACAGTTGATGAGGTATGGAGAGATATCCAAATGAGCAAAGATACAAATGAGACGAGGTCTCAAGAGAGGCAATCTACTTTGGGAGAGATGACATTAGAGGACTTTTTGGTGAAAGCCGGCGTTGTTTCGATTGCATCTTCTAATAGAAAGAATACTACTACTGATCCTAATGTTGGTGTTACTGTCGATCCAAATGTAGCGTTACCGCAATTTGCTCCGCATGGTCCGTGGATGCAGTATGCGCAACCACATTATCAGCATCCACAACAAAGTGTGATGGGGATGTATGTTTCGGGCCAGAATATCCCACAGCCATTGCACATGGCGGCTGCTGGTGCTCCATTGGATGTTGCATTTGGAGATGGTCAGGTGGCATTGGCTTCACCGGTGATGGGAAACTTATCCGATTCAAAGAAATCTGCGAGGAAACGGGGCTTACCGGAGGACATGGCAGAGAAGACCGTTGAGAGGAAGCAGAAGAGGATGATCAAGAATCGGGAATCGGCTGCACGTTCGAGAGCAAGGAAACAGGCATACACAACTGAATTGGAGATCAAAGTCTCGCGTCTGGAAGAGGAAAATGAAAAGCTGAGGAAAGAGAAGGAGCTTTACAACATGTTAGCCAATGCTCCACCTCCCGAACCAAAATGTCAGCTTCGCCGCGTATCATCGGCTTCATTCTGA 969 0.4603 MGSQVVGDNNEMHSQLQPLARQNSMYNLTLDEVQSQLGDLGKPLSSMNLDELLKNVWTVEANQSIHMDNENAAQAGQLALQRQPNLSITGPLSKKTVDEVWRDIQMSKDTNETRSQERQSTLGEMTLEDFLVKAGVVSIASSNRKNTTTDPNVGVTVDPNVALPQFAPHGPWMQYAQPHYQHPQQSVMGMYVSGQNIPQPLHMAAAGAPLDVAFGDGQVALASPVMGNLSDSKKSARKRGLPEDMAEKTVERKQKRMIKNRESAARSRARKQAYTTELEIKVSRLEEENEKLRKEKELYNMLANAPPPEPKCQLRRVSSASF 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00173 322 Pfam bZIP transcription factor 252 299 IPR004827 GO:0003700|GO:0006355
Car05g00173 322 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 255 270 IPR004827 GO:0003700|GO:0006355
Car05g00173 322 PANTHER BZIP TRANSCRIPTION FACTOR 3 320 - -
Car05g00173 322 CDD bZIP_plant_BZIP46 252 299 - -
Car05g00173 322 SUPERFAMILY Leucine zipper domain 252 299 IPR046347 GO:0003700|GO:0006355
Car05g00173 322 MobiDBLite consensus disorder prediction 300 322 - -
Car05g00173 322 Coils Coil 275 305 - -
Car05g00173 322 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 3 320 IPR043452 GO:0003700|GO:0045893
Car05g00173 322 Gene3D - 250 304 - -
Car05g00173 322 SMART brlzneu 248 312 IPR004827 GO:0003700|GO:0006355
Car05g00173 322 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 250 295 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00173 Car-Chr5 4009317 4014050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00173 17 322 bZIP Transcription Factor Family AT3G56850 51.780 1.46e-84 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car05g00173 bZIP_1 8.9e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00173 K14432 - gmx:100784924 432.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00173 05 4009317 4014050 Car05g00173 05 4009317 4014050 ECH