Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00171 ATGAAGAAGTCATGGCCATTGCAGAGTGTGAAGAGACAAAGAAACCTTATGACATTTACTGGTTCTGCATTTTTCAGTTCTTCAAACCCTAAGTGGTTATTTGTAAATCTGTTGGAAAACAAGATGGTGAGTTGCTTGACTGATTTGGCGAAGACATATGTGGAGAAATTGATAAATGGGGTAATAGCAGAATCACGTCATGTATTTTGCTTCACGTGCATTGCTAAGGAATTCGAAGAAGAAAAATCTAGGTTGGAAGTAGAAAGAAAAACTTTGGAGCAACGTGCTAAAGTGGCAACAGGAAGAGATGAAGACATTCGAGCCAATGTTCGTTTCTGGGAAGAGGAAGTTGAAAAGCTCATTCAAAAGGACATCAAAACAAAACAAACATGTTTTTTTGGATTCTGTCCTGATTGCATATGGCGATATAAAAGGGGAAAACAGTTGGCAAATAAGATGGAGGAGATTAAACGATTAACAGAAAAGGGACAGAAACTTGAAAATATTGAACTCCCTCGCCGTCTTCCAGATGTTGAACGTTATTCATCCGAAGATTACATTCGTTTTGAAGGCAGAGAGTCAAAATACAAAGAGCTGTTTGATGCACTAAAAGATGACAAGAACTATATAACCGGATTGCAAGGGATGGGGGGAACCGGAAAAACTACATTGGCCAAAGAATTAGGTAAAGAACTAAAGAAATCTGAACAATTCGCTCATGTCATTGATACAACAGTGTCATTTACTCCTGATATAAAAAAGATTCAAGATGATATTGCTGGACCTTTAGGATTGAAATTGGAGAACTGTAATGACTCAGATCGACCCAAAAAACTCTGGAGCAGATTAACAAATGGTGAGAAAATTCTTATAATAATGGATGATGTGTGGGATCGAGACCCCCCTCTTGATTTTGATGTAATAGGAATTCCAAAACGAGACAATCACAAAGGTTGCAAAGTTCTTATAACCACACGCAGTAAACGAATATTAAATAAAATGAGTTGTGATAAGAAAGTTGAATTGGAGATTTTATCTGACGAAGACGCATGGATCATGTTCAAAAGGTATGTCGGTATAAACAATATTTCTTCAAAAAATTTGATCAGTAAGGGACATAAAATTACTAAGGAATGCAAAGGATTACCAGTTGCAATTGCAGTCATTGCCAGCAGTTTAAATGGCCAACAACTTCGCAAGCATGAGTGGGATGCGACCTTGAAATCCTTGAAGAAGCCTGTGACCATGCATGGTGTTGATGAAGATATGGCTGGAATTTATAAATGTTTGAAGTTTAGCTATGATTATATGAAGGATGAAAAGGCCAAGCGATTGTTCCTCTTATCCTCTATATTCCCAGAAGATAAAGAAATTTCTGTTGAAATTCTAACTAGACTTGGCATTGGAACAGGCCTTTTTGGGGAAGATTATGGCTGCTACGATGATACTCGAAACCAAGTAGTTGTTGCCAAAAATAAACTCATAGATTCTTGTTTGTTGTTGGATGTCGGTGAAAGACATGTAAAAATGCATGATTTAGTTCGTGATGCGGCTCAATGGATAGCGAACAAAGAGATTCGGGGTGTAAATTTATCTATCAAAGATCAAAAGTTATTGGTTCAAAAAGAAATAAATATTAAATATTTATTATGTGAAGGGAAGGACATGGATTTGTTTTCTTGTAAATTTGAGTGTTCCAAACTTGAGACTCTAGTTGCTGACATAGATAGAGATGAAAGCCAGAAATGTATGGAAGTCCCTAATTCTTTCTTTAAAAATATTGTCAATCTTCGAGTTTTATACTTTACAGGTAATGAAGAACAGCCTCTATCATTACCACAATCAATTCAGTCATTGACGAATATTCGATCTCTGTTGGTTGATAAAGTGGATTTAGGTGACATTTCTATTTTGGGAAAGCTGCAAAGTCTTGAGACTCTTGATTTGGTGTCCTGCGCAATCAATGAATTGCCattcgaaattacaaaattggggaaatttaaattgttgaacttggataattgtgaaattcgaaGGAATAATCCATTTGAAGTCATTGAAAAATGCTCATCCCTGGAAGAGTTGTATTTCATAAAGAGTTTTAACGGTTTTTGTCGAGAAATAACCATACCCGAGTTGCAAAGGTATCGTATTTGTAACTACTGGTATATAATGAATTATTCACAATCAAAATATGTGAATTTTTGTGCTAGTGATGATGCATCTGTTTTTTCAGAAGCAACGTTCAAGTATTTCATGCGAACAACAGAGTTTCTTCGACTAATAGGAATTAAGAGGGGATGGAGAAATCTCATGCCTGAAATTGTTCCTATAGGTCAAGGTATGGATGATCTTGTTGAGCTTCGCTTGAGTTGTATTTCACAGTTACAGTGTCTCATAGACTCTATTGGTTCTCAAGTACCAAGTCTTTTGTCCAAGTTGGTTGTACTAGAACTGGATAATATGGAAAATTTAGAAGAACTATTCAATGGTTCCTTATCCTTTGACTCTTTGAAGAATTTAGAGATGTTATCGATGAAGCAGTGTAAAAAATTTAAAAGATTGTTTAATTGCAAGCTAAATCTCTGCAATCTGAAGACCTTGATACTGGAGAAATGCCCAATGTTGGTTTCCCTATTTCCATTGATGTCTCGGAATCTGGTGCAGCTAGAGAAATTGGAAATAGCTGATTGTGAGGAACTGAAAAACATAATAGATATAAAAAGAGAGGAGGAATCAATAGAAGAAATAGACGATGGTGATAATAATAACAAGAAACATGGCTCGATTTTTCCAAAACTAAAAGTTCTTGATATTGAGGGATGTCACCGATTAGAATCGATACTTCCCTTCCTCTCTTCTCAAGATTTTCCAGTACTAGAAGCTATCTTAGTAAGAAAATGTGATGCGCTGAAATACATATTTAGCCAATACCAACATGTTGAACTCAAGTCACTAAAAAAAATGCTGCTCTGTCAATTACCAAATTTCATACACATTTTTCCTAAATGCTATGCTTCCATGTCTTCGTCTGTGAATGAGTCATATTCCACTCCCAGAGATGGTTTCAAGGAACAAATAGAATTGGACCCTATCAAATGCAATATCTTCTCTTGGACTTATATATGTTGTCATGGTGATAAATTTGGGAGTTCGTCAACAACTAGAATTCCATTGGTTTCTAGGGATCAACCACAGGACTACTCAATCGCATCGGTATCAAATTCACACGATCTTCAAATATGGGAACGTGTTCAATGTCTTCAAGTACAACCACATATCATGTGCAATATTAAAGAGATTGTGCTGTCTCATTTTCTGAAGATGAAATCGGTGTTTATCCTGTCTGTTGCTCCAAGAATGTTGGAAACTTTGAAAATTATGAACTGTGATGAATTGAAGCACATAGTTATAGACACCGGAGATCATGATAGTAGTGGCAATAATTGGGGCAATGTCTTCCCTACATTGAAAAGGCTCTACGTTGGTAACTGCATGCAATTGGAATACATATTTGGACCCTACACTAATGACCATCAAAACCACACTGAGATTCACCTTCATCTTCCGGCATTGCAATATCTCAATCTTTGCAATCTGCCAAAAGAATGCAAGGAGTTGAAACATATCATTGAAGATGACTTGCAGAACCAAAACATGTTGAATTCCTTCCCAAAGCTAAAAGTACTTGTTGTAGTAAAGTGTTGCAAGTTGAAATATGTCTTTCCGGTCTCCATATGTAAAGAGTTTCTTGAGCTAGAGGTGCTAATTATAAGAGAAGCAAATGAATTGGAAGAAATATTCAAAAGTGAAGGTGATCAAAAAGTCAAGATTCCAAAACTAAATTTTGTAGTATTTGACAAACTACCAAGCCTCTTCTTCACCCAAGGAATTCAATTTCAAACAGCAAAAAATCGTTTTATACAAAATTGTCAAAAACTCTCTTTGGCTTCAGCATGTGCTCCCTACGACATGGATGAAGTTTATTACTTTTTCATAGTCAACAAAGGTACACACTATACACAATATTTTTTTAAACCATTATTACATaatagacatcttcccgaggtagctagagctttactatttgcaaataaggttccaaaatatttgtggggtgaagctgttttaactgcatcatatgtaattaatcgaatgtcatctaaagttttttattttcatacccctcttgatgtttttcaaaattattttcctttcactagtgtctctgctgatttgccactaaaagtttttggttgcactacgtttgttcatgaacataaacaacttgacaaactcgagccacaaacaataaaatgtgtgtttaccggttactctccaactcagaagaggtatcagtgttttgaaccaaaatcaaaaagaaattttgtaaccaaggatgttacttttgttacaaatcaaccattttttactgatattcatcttcaggaaggaaattttaacgaagattcatcttttacttttgaaaacatcattactttaagtgatatagtgttgtcacaaaattctgagacttatattgatgcaccaaaagaaaatgtccaagaatccatattggaactcaatgatcaatttcaaatcaaaatcacaatgatcaaattcttgatctcaataataatgaaggaccacctgaaatgccataacataatgactcagataaagagacacaaagcagTTTCTCTGAATGATGATGTTGTCGTGAAAGTAACCTCAACTATTGAGGAGCAGTTTCCTAAGGATGATGAATTTAGAGTTTCAAAATCTAAGCCCTCTCCAAGCAATAGCATTCCTTTGCCTCTTGCATTTCAGACTCCTTCCATGCCTTCTAAAGGGAACCCTTCTCAAATAGTGAAATATTTAAGTTCTCCTTCTCTTGTCACATGGGAGCTTGAGGAACTGGTCTCCAAGAAGCATTTGGATTACAAGAACTTGTCTTTGTTGACTGACTTTCTTGTAAAGTATCCTTCAGTTCTTTTAAGGGACACTTCACTTAGTAACCGATACAAGGGTTATGCATACAACTGCCTAGCTGAGCTATTGAAATTCCTCCAAACCAATAGTGTGTTGGATGTGTTAGGTTCAAGCCAAGATGAATTTGTTGAGTTATTACAAGATGTGCGCAAATGTGCTTTTGATAAGGATTGGTTGGATGGTGTCGAAAAACGCGCTTTGTTTCCTGATTTGCAATTTTCTCAAGATGTATTCCAAAATTTATTGGATTCCAAGAAACAGGTTACCAAGGATGTTGAAGTGATGCGTTTGAAGATTGACATTTTAGCTCAACAAATGGAAGATTTTAACCATCAATTGACCTCATCTGAAGCTGTTTTAGAGAGTATCATTCAACAGGAGGCACAAATTTTAGAAACTAAGGAAATATTGATTGCTTTTACCGGATTGAGTGGATCAATCGTGCTTGGTAATGTGTGGCCTCTAAAGCTCATATAA 5469 0.3161 MKKSWPLQSVKRQRNLMTFTGSAFFSSSNPKWLFVNLLENKMVSCLTDLAKTYVEKLINGVIAESRHVFCFTCIAKEFEEEKSRLEVERKTLEQRAKVATGRDEDIRANVRFWEEEVEKLIQKDIKTKQTCFFGFCPDCIWRYKRGKQLANKMEEIKRLTEKGQKLENIELPRRLPDVERYSSEDYIRFEGRESKYKELFDALKDDKNYITGLQGMGGTGKTTLAKELGKELKKSEQFAHVIDTTVSFTPDIKKIQDDIAGPLGLKLENCNDSDRPKKLWSRLTNGEKILIIMDDVWDRDPPLDFDVIGIPKRDNHKGCKVLITTRSKRILNKMSCDKKVELEILSDEDAWIMFKRYVGINNISSKNLISKGHKITKECKGLPVAIAVIASSLNGQQLRKHEWDATLKSLKKPVTMHGVDEDMAGIYKCLKFSYDYMKDEKAKRLFLLSSIFPEDKEISVEILTRLGIGTGLFGEDYGCYDDTRNQVVVAKNKLIDSCLLLDVGERHVKMHDLVRDAAQWIANKEIRGVNLSIKDQKLLVQKEINIKYLLCEGKDMDLFSCKFECSKLETLVADIDRDESQKCMEVPNSFFKNIVNLRVLYFTGNEEQPLSLPQSIQSLTNIRSLLVDKVDLGDISILGKLQSLETLDLVSCAINELPFEITKLGKFKLLNLDNCEIRRNNPFEVIEKCSSLEELYFIKSFNGFCREITIPELQRYRICNYWYIMNYSQSKYVNFCASDDASVFSEATFKYFMRTTEFLRLIGIKRGWRNLMPEIVPIGQGMDDLVELRLSCISQLQCLIDSIGSQVPSLLSKLVVLELDNMENLEELFNGSLSFDSLKNLEMLSMKQCKKFKRLFNCKLNLCNLKTLILEKCPMLVSLFPLMSRNLVQLEKLEIADCEELKNIIDIKREEESIEEIDDGDNNNKKHGSIFPKLKVLDIEGCHRLESILPFLSSQDFPVLEAILVRKCDALKYIFSQYQHVELKSLKKMLLCQLPNFIHIFPKCYASMSSSVNESYSTPRDGFKEQIELDPIKCNIFSWTYICCHGDKFGSSSTTRIPLVSRDQPQDYSIASVSNSHDLQIWERVQCLQVQPHIMCNIKEIVLSHFLKMKSVFILSVAPRMLETLKIMNCDELKHIVIDTGDHDSSGNNWGNVFPTLKRLYVGNCMQLEYIFGPYTNDHQNHTEIHLHLPALQYLNLCNLPKECKELKHIIEDDLQNQNMLNSFPKLKVLVVVKCCKLKYVFPVSICKEFLELEVLIIREANELEEIFKSEGDQKVKIPKLNFVVFDKLPSLFFTQGIQFQTAKNRFIQNCQKLSLASACAPYDMDEVYYFFIVNKGTHYTQYFFKPLLHNRHLPEVARALLFANKVPKYLWGEAVLTASYVINRMSSKVFYFHTPLDVFQNYFPFTSVSADLPLKVFGCTTFVHEHKQLDKLEPQTIKCVFTGYSPTQKRYQCFEPKSKRNFVTKDVTFVTNQPFFTDIHLQEGNFNEDSSFTFENIITLSDIVLSQNSETYIDAPKENVQESILELNDQFQIKITMIKFLISIIMKDHLKCHNIMTQIKRHKAVSLNDDVVVKVTSTIEEQFPKDDEFRVSKSKPSPSNSIPLPLAFQTPSMPSKGNPSQIVKYLSSPSLVTWELEELVSKKHLDYKNLSLLTDFLVKYPSVLLRDTSLSNRYKGYAYNCLAELLKFLQTNSVLDVLGSSQDEFVELLQDVRKCAFDKDWLDGVEKRALFPDLQFSQDVFQNLLDSKKQVTKDVEVMRLKIDILAQQMEDFNHQLTSSEAVLESIIQQEAQILETKEILIAFTGLSGSIVLGNVWPLKLI 1822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00171 1822 Pfam NB-ARC domain 198 435 IPR002182 GO:0043531
Car05g00171 1822 PANTHER - 98 1003 - -
Car05g00171 1822 Gene3D - 433 517 IPR036388 -
Car05g00171 1822 Gene3D - 345 432 IPR042197 -
Car05g00171 1822 PRINTS Disease resistance protein signature 283 297 - -
Car05g00171 1822 PRINTS Disease resistance protein signature 210 225 - -
Car05g00171 1822 PRINTS Disease resistance protein signature 379 393 - -
Car05g00171 1822 PRINTS Disease resistance protein signature 929 945 - -
Car05g00171 1822 MobiDBLite consensus disorder prediction 1588 1607 - -
Car05g00171 1822 SUPERFAMILY L domain-like 509 1002 - -
Car05g00171 1822 SUPERFAMILY RNI-like 1095 1268 - -
Car05g00171 1822 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 447 IPR027417 -
Car05g00171 1822 Gene3D Ribonuclease Inhibitor 518 730 IPR032675 -
Car05g00171 1822 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 98 1003 - -
Car05g00171 1822 Gene3D Ribonuclease Inhibitor 1068 1289 IPR032675 -
Car05g00171 1822 Gene3D Ribonuclease Inhibitor 766 917 IPR032675 -
Car05g00171 1822 Coils Coil 149 169 - -
Car05g00171 1822 Coils Coil 75 123 - -
Car05g00171 1822 SMART AAA_5 207 364 IPR003593 -
Car05g00171 1822 Gene3D - 168 342 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00171 Car-Chr5 3949565 3967322 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00171 212 626 WRKY Transcription Factor Family AT5G45050 25.404 1.92e-14 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00171 - - cam:101507086 1791.16