Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00170 ATGGTGAGTTGCTTGACTGATTTGGCGAAGACATATGTGGAGAAATTGATAAATGGGGTAATAGCAGAATCACGTCATGTATTTTGCTTCACATGCATTGCTAAGGAATTCGAAGAAGAAAAATCTAGGTTGGAAGTAGAAAGAAAAACTTTGGAGCAACGTGCTAAAGTGGCAACAGGAAGAGATGAAGATATTCGAGCCAATGTTCGTTTCTGGGAAGACGAAGTTGAAAAGCTCATTCAAGAGGACATCAAAACAAAACAAACATGTTTTTTTGGATTTTGTCCTGATTGCATATGGCGATATAAAAGGGGAAAACAGTTGGCAAATAAGATGGAGGAGATTAAACGATTAACAGAAAAGGGAGAGAAACTTGAAAACATTGAACTCCCTCGCCGTCTTCCAGATGTTGAACGTTATTCATCCGAAGATTACATTCGTTTTGAAGGCAGAGAGTCAAAATACAAAGAGCTGTTTGATGCACTAAAAGATGACAAGAACTATATAACCGGATTGCAAGGGATGGGGGGAACTGGAAAAACTACATTGGCCAAAGAATTGGGTAAAGAACTAAAGAAATCTGAACAATTCGCACATGTCATTGATACAACAGTGTCATTTACTCCTGATATAAAAAAGATTCAAGATGATATTGCTGGACCTTTAGGATTGAAATTGGAGAACTGTAACGACTCAGATCGACCCAAAAAACTCTGGAGCAGATTAACAAATGGTGAGAAAATTCTTATAATAATGGATGATGTGTGGGATCGAGACCCCCCTCTTGATTTTGATGTAATAGGAATTCCAAAACGAGACAATCACAAAGGTTGCAAAGTTCTTATAACCACACGCAGTAAACGAATATTAAATAAAATGAGTTGTGATAAGAAAATTGAATTGGAGATTTTATCTGACGAAGACGCATGGATCATGTTCAAAAGGTATGTCGGTATAAACAATAGTTCTTCAAAAAATTTGATCAGTAAGGGACAAAAAATTACTAAGGAATGCAAAGGATTACCAGTTGCAATTGCAGTCATTGCCAGCAGTTTAAAGGGCCAACAACTTCGCAAGCATGAGTGGGATGCGACCTTGAAATCCTTGAAGAAGCCTGTGTCCATGCATGGTGTTGATGAAGATATGGCTGGAATTTATAAATGTTTGAAGTTTAGCTATGATTATATGAAGGATGAAAAAGCCAAGCGATTGTTCCTCTTATCTTCTATATTCCCAGAAGATAAAGAAATTTCTGTTGAAATTCTAACTAGACTTGGCATTGGAACGGGCCTTTTTGGGGAAGATTATGGCCGCTACGATGATACTCGAAACCAAGTAGTTGTTGCCAAAAATAAACTCATAGATTCTTGTTTGTTGTTGGATGTCGGTGAAAGACATGTAAAAATGCATGATTTAGTTCGTGATGCGGCTCAATGGATAGCGAACAAAGAGATTCGGGGTGTAAATTTATCTATCAAAGATCAAAAGTTATTGGTTCAAAAAGAAATAAATATTAAATATTTATTATGTGAAGGGAAGGACATGGATTTGTTTTCTTGTAAATTTGAGTGTTCAAAACTTGAGATTCTAATTGTCGATATAGATAGAGATGAAAGCCATAAATGTATGGAAGTCCCAAATTCTTTTTTTAAAAATATTGTCAAGCTTCGAGTTTTATACTTTACAGGTAATGAAGAACAACCTCTATCATTACCACAATCAATTCAGTCATTGACGAATATTCGATCTTTGTTGGTTGATAAAGTGGATTTAGGTGACATCTCTGTTTTGGGAAAGCTGGAAAGTCTTGAGACTCTTGATTTGGTGTCCTGCACAATCAATGAATTGCCattcgaaattacaaaattgggaaaatttaaattgttgaacttggataattgtgaaattcgaaGGAATAATCCATTTGAGGTCATTGAAAAATGCTCATCACTTGAAGAGTTATATTTCATAGAGAGTTTTAACGGTTTTTGTCGAGAAATAGCCATACCTGAGTTGCAAAGGTATCGTATTTGTAACAACTGGGATATAATGAATTATTCACAATCAAGGTATTTGAGTTTTTGTGCTAGTGATGATGCATCTGTTTTTTCAGAAGCAACGTTCAAGTATTTCATGCGAACAACAGAGTTTCTTCGACTAATAGGAATTAAGAGGGGATGGAGAAATCTCATGCCTGAGATTGTTCCTATAGGTCAAGGTATGGATGATCTTGTTGAGCTTCGCTTGAGTTGTATTTCACAGTTACAGTGTCTCATTGACTCTATTGGTTCTCAAGTACCAAGTCTTTTGTCCAAGTTGGTTGTACTAGAATTGGATACGATGGAAAATTTGGAAGAACTATTCAATGGTTCCTTATCCTTTGACTCTTTGAAGAATTTAGAGATGCTATCAATGAAGCAGTGTAAAAAATTTAAAAGATTGTTTAATTGCACGCTAAATCTCTGCAATCTGAAGACCTTGATACTGGAGAAATGCCCAATGTTGGTTTCCCTATTTCCATTGATGTCTTGGAATCTGGTGCAGCTAGAGAAATTGGAAATATCTGAATGTGAGGAATTGAAAAACATAATAGATGTAAAAAGAGAGGAGGAATCAAGAGAAGAAATAGATGTTGGTGATAATGATAACAAGAGGCATGGCTCGATTTTTCCAAAATTAAAAGTTCTTGATATTGAGGGATGTCACCGATTAGAATCGATACTTCCCTTCCTCTCTTCTCAAGATTTTCCAGTACTAGAAGCTATCTTAATAAGAAAATGTGATGAGCTGAAATACATATTTAGCCAATACCAACATGTTGAACTCAAGTCACTAAAAAAAATGCTGCTCTGTCAATTACCAAATTTCATAGACTTTTTTCCAAAATGCTATGATTCCATGTCTTCGCCTGTGAATGAGTCATATTCCACTCCCAGAGATGGTTTCAAGGAACAAATACAATTGGACCCTATCAAATGCAATATCTTCTCTTGGACTTATATATGTTGTCATGGTGATAAATTTGGGAGTTCGTCAACAACTAGAATTCCATTGGTTTCTGGGGATCAACCACAGGACTACTCAATCGCATCGGTATCAAATTCACACAATCTTCATATATGGGAACGTACTCAATGTCTTTTGGTACAACCACATATCATGTGCAATATTAAAGAGATTGTGCTGTCTCATTTTTTGAAGATAAAATCGGTGTTTATCCTATCTGTTGCTCCAAGAATGTTGGAAACTTTGACAATTACGAACTGTGATGAATTGAAGCACATAGTGATAGACACCGGAGATCATGACAGTAGTGGCAATAATTGGGGCAATGTCTTCCCTACATTGAAAAGGCTCTACGTTGAAGATTGCATGAAATTGGAATACATATTTGGACAATACACTATTGACCATCAAAACCAAACTGAGATTCACCTTCATCTTCCAGCATTGCAAAATCTCATTCTTCGCAATTTGCCAAGTTTAGTCGCCATGTGTCCCAAACAATATTGCACAACATTTCCAAATTTGAAAGTACTTGAACTAAAAAAATGCTCCCGAGTTGATATCAAATCTATTGGTGATTTCATTTTTCATTCGGTTTCAAAATCTCAAGACAGTACAATCATGAAGGAATTGAGTGTGAAACATTTTATTGCTTTGGAGAGTCTCATGGTAAATAACTCCAAAGCAGAAAATATATTTTGTTTCGATGAAATGGATGGACAACCACTGAACTTAGGGTTGCAAAAGATTGAGTTATCTGATATGCATGATATGAATTACCTTTTTGGGGGACCCAAAAATTCTTTTTCCCTGAAAAACCTTACAAAGATAATAATCGTGCGATGTGAAATATTGGAAGTAGTTTTCTCCACTTCTAGTTTAAGATGCCTATCAAAATTGGTTGATCTAAGAATAGAAGAATGCAAGGAGTTGAAGCATATCATTGAAGATGATTTGCAGAATCAAAACATGTCGAATTCCTTCCCAAAGCTAAAAGTACTTGTTGTAGTAAAGTGCTGCAAGTTGAAATATGTCTTTCCGGTCTCGATGTGTAAAGAGTTTCTTGAGCTAGAGGTGCTAATTATAAGAGAAGCAGATGAACTGGAGGAAATATTCAAAAGTGAAGGTGATCAAAAAGTCAAGATTCCAAAACTAAATTTTGTAGTATTTGACAAACTACCAAGCCTCTTCTTCACCCAAGGAATTCAATTTCAGACAGCAAAAAATCGTTTTATACAAAATTGTCAAAAACTCTCTTTGACTTCAGCATATACTCCCTATGACATGGTTGAAGTTTATCACTTTTTCTTAAACAGTACAGATTATGAAACATATGAAGTCTTTCGGAGTCTATTTCGACAATTACAAGAAGAGTCCAATGGTCGCGATAGTGTTAATGAAAATCCAAGTGCAGAAACCACTAAATATTTTGTTACTGTTGGGTTGGAAGTTGAAACAGCATTACGCTATTCTTCTTCAAAGATACAAATGAAACAAACACCAGAAGCAGAGCATGAATTTGTTGAAAATGATCCTGATTTAGAGATACCACCAGTAGCAATATTACCAACAAATTCAATAGAGTTGGTGAATGAACATTCAACGAGTCAACAATGTTTGATGAACCAACAACATCCACTTGGAGAATTTGATACTACCGTCAAATCTTCTCGGGAAAATAATTTTGTTGAAGAAGGAACTGCATTAACAAATGCCAACACAATAACACCCTCAACTCATTTAGAATTAGTCAGTTCATCAAAGGAACAAGATGTTGATGTTGGAGACTCTTTGGGAACTACCAAGACTAATGATGATCAAGTTTCTCTAAATGATGATGTTGTCGTGAAAGTAACCTCAACTAGTGAGGAGCAGTTTCCTAAGGATGATGAATTTAGAGTTTCAAAATCTAAGCCCTCTCCAAGCAATAGCATTCCTTTGCCTCTTGCATTTCAGACTCCTTCCATGCCTTCTAAAGGGAACCCTTCTCAAATAGTGAAAGATTTAAGTTCTCCTTCTCATGTCACATGGGAGCTTGAGGAACTGGTCTCCAAGAAGCATTTGGATTACAAGAACTTGTCTTTGTTGACTGACTTTCTTGTTAAGTATCCTTCAGTTCTTTTAAGGGACACTTCACTTAGTAACCGATACAAGGGTTATGCATACAACTGCCTAGCTGAGCTATTGAAATTCCTCCAAACCAATAGTGTGTTGGATGTGTTAGGTTCAAGCCAAAATGAATTTGTTGAGTTATTACAAGATGTACGCAGATGTGCTTTTGATAAGGATTGGTTGGATGGTGTCGAAAAGCGCGCTATGTTTCCTGATTTGCAATTTTCTCAAGATGTATTCCAAAAGTTATTGGATTCCAAGAAACAGGTTACCAAGGATGTTGAAGTGATGCGTTTGAAGATTGACATTTTAGCTCAACAAATGGAAGATTTTAACCATCAATTGACCTCATCTGAAGCTGTTTTGGAGAGTATCATTCAAAAGGAGGCAGAAATTTTAGAAACTAAGGCTGCTTTAAGTGCCCCTCTTGGCTATTAG 5556 0.3575 MVSCLTDLAKTYVEKLINGVIAESRHVFCFTCIAKEFEEEKSRLEVERKTLEQRAKVATGRDEDIRANVRFWEDEVEKLIQEDIKTKQTCFFGFCPDCIWRYKRGKQLANKMEEIKRLTEKGEKLENIELPRRLPDVERYSSEDYIRFEGRESKYKELFDALKDDKNYITGLQGMGGTGKTTLAKELGKELKKSEQFAHVIDTTVSFTPDIKKIQDDIAGPLGLKLENCNDSDRPKKLWSRLTNGEKILIIMDDVWDRDPPLDFDVIGIPKRDNHKGCKVLITTRSKRILNKMSCDKKIELEILSDEDAWIMFKRYVGINNSSSKNLISKGQKITKECKGLPVAIAVIASSLKGQQLRKHEWDATLKSLKKPVSMHGVDEDMAGIYKCLKFSYDYMKDEKAKRLFLLSSIFPEDKEISVEILTRLGIGTGLFGEDYGRYDDTRNQVVVAKNKLIDSCLLLDVGERHVKMHDLVRDAAQWIANKEIRGVNLSIKDQKLLVQKEINIKYLLCEGKDMDLFSCKFECSKLEILIVDIDRDESHKCMEVPNSFFKNIVKLRVLYFTGNEEQPLSLPQSIQSLTNIRSLLVDKVDLGDISVLGKLESLETLDLVSCTINELPFEITKLGKFKLLNLDNCEIRRNNPFEVIEKCSSLEELYFIESFNGFCREIAIPELQRYRICNNWDIMNYSQSRYLSFCASDDASVFSEATFKYFMRTTEFLRLIGIKRGWRNLMPEIVPIGQGMDDLVELRLSCISQLQCLIDSIGSQVPSLLSKLVVLELDTMENLEELFNGSLSFDSLKNLEMLSMKQCKKFKRLFNCTLNLCNLKTLILEKCPMLVSLFPLMSWNLVQLEKLEISECEELKNIIDVKREEESREEIDVGDNDNKRHGSIFPKLKVLDIEGCHRLESILPFLSSQDFPVLEAILIRKCDELKYIFSQYQHVELKSLKKMLLCQLPNFIDFFPKCYDSMSSPVNESYSTPRDGFKEQIQLDPIKCNIFSWTYICCHGDKFGSSSTTRIPLVSGDQPQDYSIASVSNSHNLHIWERTQCLLVQPHIMCNIKEIVLSHFLKIKSVFILSVAPRMLETLTITNCDELKHIVIDTGDHDSSGNNWGNVFPTLKRLYVEDCMKLEYIFGQYTIDHQNQTEIHLHLPALQNLILRNLPSLVAMCPKQYCTTFPNLKVLELKKCSRVDIKSIGDFIFHSVSKSQDSTIMKELSVKHFIALESLMVNNSKAENIFCFDEMDGQPLNLGLQKIELSDMHDMNYLFGGPKNSFSLKNLTKIIIVRCEILEVVFSTSSLRCLSKLVDLRIEECKELKHIIEDDLQNQNMSNSFPKLKVLVVVKCCKLKYVFPVSMCKEFLELEVLIIREADELEEIFKSEGDQKVKIPKLNFVVFDKLPSLFFTQGIQFQTAKNRFIQNCQKLSLTSAYTPYDMVEVYHFFLNSTDYETYEVFRSLFRQLQEESNGRDSVNENPSAETTKYFVTVGLEVETALRYSSSKIQMKQTPEAEHEFVENDPDLEIPPVAILPTNSIELVNEHSTSQQCLMNQQHPLGEFDTTVKSSRENNFVEEGTALTNANTITPSTHLELVSSSKEQDVDVGDSLGTTKTNDDQVSLNDDVVVKVTSTSEEQFPKDDEFRVSKSKPSPSNSIPLPLAFQTPSMPSKGNPSQIVKDLSSPSHVTWELEELVSKKHLDYKNLSLLTDFLVKYPSVLLRDTSLSNRYKGYAYNCLAELLKFLQTNSVLDVLGSSQNEFVELLQDVRRCAFDKDWLDGVEKRAMFPDLQFSQDVFQKLLDSKKQVTKDVEVMRLKIDILAQQMEDFNHQLTSSEAVLESIIQKEAEILETKAALSAPLGY 1851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00170 1851 Gene3D Ribonuclease Inhibitor 990 1426 IPR032675 -
Car05g00170 1851 Coils Coil 34 82 - -
Car05g00170 1851 PRINTS Disease resistance protein signature 169 184 - -
Car05g00170 1851 PRINTS Disease resistance protein signature 242 256 - -
Car05g00170 1851 PRINTS Disease resistance protein signature 338 352 - -
Car05g00170 1851 PRINTS Disease resistance protein signature 888 904 - -
Car05g00170 1851 SUPERFAMILY RNI-like 1105 1363 - -
Car05g00170 1851 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 406 IPR027417 -
Car05g00170 1851 Gene3D - 304 391 IPR042197 -
Car05g00170 1851 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 58 961 - -
Car05g00170 1851 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 1173 1388 - -
Car05g00170 1851 MobiDBLite consensus disorder prediction 1584 1608 - -
Car05g00170 1851 Pfam NB-ARC domain 157 394 IPR002182 GO:0043531
Car05g00170 1851 Gene3D - 392 476 IPR036388 -
Car05g00170 1851 Gene3D - 129 300 IPR027417 -
Car05g00170 1851 Gene3D Ribonuclease Inhibitor 715 881 IPR032675 -
Car05g00170 1851 SUPERFAMILY RNI-like 1054 1189 - -
Car05g00170 1851 Coils Coil 108 128 - -
Car05g00170 1851 Gene3D Ribonuclease Inhibitor 477 707 IPR032675 -
Car05g00170 1851 PANTHER - 1173 1388 - -
Car05g00170 1851 PANTHER - 58 961 - -
Car05g00170 1851 SUPERFAMILY L domain-like 468 951 - -
Car05g00170 1851 MobiDBLite consensus disorder prediction 1628 1651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00170 Car-Chr5 3861912 3874304 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00170 170 585 WRKY Transcription Factor Family AT5G45050 25.346 1.07e-13 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00170 - - cam:101508676 1956.03