Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00163 ATGGTGAGTTGCTTGGCTGAATTGGGGAAGACATATGTGGAAAAATTGATAAATAGGGTAACAGCAGAATTACGTTTTGTATTTTGCTTCACATGCATTGCTAAGGAATTCGAAGAAAAAAAACCTGAGTTGGAAGCTGAAAGAAAAACTATGGAGCAACGTGTTCAAGTAGCAGTAAGTGAAGGTAAAGTCATTCGGGCTAATGTTCTTCATTGGATAAAGAAAGTTGATAAGCTGATTCAAGAGAACACCAAAACAAAACAAACATGTTTTTTTGGATTTTGTCCTGATTGCATAGGGCGATATAAAAGGGGAAAGGAGTTGGTAAATATGACAGAGGAGATTAAATCGTCAATAGAAAAGGGAGAAATATTTGAAATTATTGATCTTCCTCAATCTCTTCCAGGTTGTGGTTATTATTCATTGGACTATTACATTCAATTTAAAGGCAGAGAGTCAAAATACAAAGAACTATTGGATGCACTAAAAGATGACAACAACTATATGACCGGATTGCAAGGGATGGGGGGCACCGGAAAAACTACATTGGCCATAAAAGTGGGTAAAGAACTAGAGGAATCTAAAAAACTCGATCATGTCATTGATACAACAGTGTCATTTACTCCTGATATAAAAAAGATTCAAGATGATATTGCTGGACCTCTAGGATTGAAACTCAAAGACTGTAATAACTCAGACCGACCCAAAATACTAAGGAGCAGATTAACAAATGGTGAGAAAATTCTTCTTATTCTGGATGATGTGTGGGATCAAGACACCTCTCTTGATTTTGATAGAATAGGAATTCCAAAACGAGACAATCACAATGGTTGCAGAGTTCTTATAACCACACGTAGTAAACGAATACTCGATACAATGAATTGTGATAAGAAAATTGAATTGGAGATCTTATCTGATGAAGATGCATGGATCATGTTCAAAAATTATGCCGGTATAAATGATAGTTTTTCAAATAGTTTGACCAGTAAGGGACAAAAAATTGCTCGCGAATGCAAAGGATTACCGGTTGCAATTGCAGTAATTGCCAGAAGTTTAAAGGGCCAACAACATCGCAAGCATGAGTGGGATGCGACCTTGAAATCCTTGAAGAAGCATGTGTCCATGCCTAATGTTGATGACGATGTGGTTGGAATTTATAAATGTTTGAAGTTTAGCTATGATTATATGAAGAATAAAAAAGCCAAGGAATTGCTCCTCTTATCTTCTGTATTCCCAGAAGATGAAATAATTTCTGTTGAAATTCTAACTAGACTTGGCATTGGAATGGGCCTTTTTGGGGAGGATTATCGCAGCTACAATGATACCCGAATCGAAGTAGTTGTTGCCAAAAATAAACTCATAGATTCTTGTTTGTTGTTGGATGTCGTTGATACCGAAAACAAAGAAAATGTCAAAATGCATGATTTAGTTCGTGATGCGGCTCAATGGATAGCGAACAAAGAGATTTGGGATGTAAATTTATCTATAAAAGATCAAAAGTTATTGGTTCAAAAAGAAATAAATATTAAATATTTATTTTGTAAAGGGAAGGACATGGATTTGTTTTCTTGTAAATTTGAGTGCTCCAAACTTGAGACTCTAATTGTTGACATAGATAGTGAAGGCCAGGAATGTATCGAAGTCCCAAATTCTTTCTTTGAAAATATTTTCAAGCTTCGAGTTTTATACTTTAAAAGTACTGACAAAGTGAACTTTCTATCATTACCACAATCAATTCAGTCATTGACGAATATTCGATCTTTGTTGGTTGAAGGAGTGGATTTAGGTGACATCTCTATTTTGGGAAAGCTACCAAGTCTTGAGACTCTTGATTTGAATTTATGCACAATCAATGAATTGCCATTTGAAATTACAAAATTGGGGAAATTTAAATTGTTGAACTTGGATACTTGTGTTATTCGAAGGAATAATCTGTTTGAAGTCATTGAAAAATGCTCATCACTGGAAGAGTTGTATTTCAAATATAGTTTTAACAATTTTTGTCGAGAAATAACCATACCCGAGTTGCAAAAGTTTCATATTTATAACGACTGGGGTAGAATGAAATATTCACAATCAAAATATGTAAATTTTTGTGCTAGTGATGCATGTTATTTTTCAGAAACAACACTCAATTATTTCATGCGAACCACAGAGTTTCTTCGACTAAAAGGAATTAAGAGGGGATGGAGAAATCTCATGCCTGAGATTGTTCCTATAGATCTAGGTATGAATGATCTTGTTGAGCTTCATTTGAGTTCTATTTCACAGTTACAGTGTCTCATTAAAACTATTGGTTCTCAAGTACCAAATGTATTGTCCAAATTGGTTGTACTAAGCTTGGATATGATGGAAAATTTGGAAGAACTATTCAATGGTTCCTTATCCTTTGACTCTTTGAAGAATTTAGAGAGGCTATCAGTGATGGAGTGTAAAAAATTTCAAAGATTTTTTAATTGCAAGCTAAATCTATGCAATTTGAAGACCTTGATACTAAAGCAATGTCCAATGTTGGTTTCCCTATTTCCATTGATGTCTCAGAATCTGGTGCAACTAGAGAAATTGGAAATAACTGATTGTGAGGAACTGAAAAACATAATAGATGTTAAAAGAGAGGAGGAATCAAGAGAAGAAATAGACGATGGTGATAATGATAACAAGAGGCACGGCTCGATTTTTCCAAAACTAAAAGTTCTTGATATTGAGGGATGTCACCGATTAGAATCGATAATTCCCTTCCTCTCTTCTCAAGATTTTCCAGTACTAGAAGCTATCTCAATAAAAAGATGTGATGGGCTAAAATACATATTTAGCCAATACCAACATGTTGAACTTAAGTCACTAAAACAAATGGAGCTCTTTCTATTACCAAGTTTCATAGACATTTTTCCGAAATGCTATGATTCCATGTCTTTGCTTGTGAATGAGTCATGTTCCACTTCCAGAGATGGTTTCAAGGCACAAATACAATTGGACCCTATCAAATGCAATATCTTCTCTTGGCCTTATTTATGTTGTCGTGGTGATAAATTTGGGAGTTCGTCAACAACTAGAATTCCATTGGTTTCTGAGGATCAACCACAGGAGTACTCAATCACATCGGTATCAAATTCACACAATCTTCATATATGGGAACGTGCTCAATGTCTTTCGGTACACCCACATTTCATGTGCAATATTAAAAACATTGTGCTGTTTCAAATTTTGAAGATAAAATCGGTGTTTATCCTGTCTGTTGCTCCAAGAATGTTGGAAACTTTGACAATTACAAATTGTGATGAATTGAAGCACATAGTGATAGACACCGAAGATCACGACAGTAGTGGCAATAATTGGGGCAATGTCTTCCCTACATTGAAAAGGCTCCACGTTCAAAAGTGCATGCAATTGGAATACATATTTGGACACTACACTAATGACCATCAAAATCACACTGAGATTCACCTTCATCTTCCAGCATTGCAATATCTCAATATTTGCAATCTGTCAAGTTTAGTCGCTATGTGTCCCAAACAATATCGCCCAACATTTCCATCTTTAAAAGAACTTGAACTAAAAAATTGCTCCCAAGTTGATATTAAATCTATCGGTGATTTCATTATTCATTCGGTTTCAAAATCTCAAGACAGTACAATTATGAAGGAATTGAGCGTGAAACATTTTATTCCTTTGGAAAGTCTGAGGGTAGATAACTTCAAAGCAGAAAATTTATTTTGTCTCAATGAAATGGATGGGCAACCAATGAACTTAAGGTTGCAAAAGATTCAGTTATCTGATATGCATAATATGAAGTACCTTTTTGGGGGACCCAAAAATTCTTTTGTCCTAAAAAACCTTACAAAGATAATAATCATACGATGTGAAATATTGGAAGTACTTTTCTCCACTTCTATTATAAGATGCCTATCAAAATTAGTTTTTCTAAGAATAGAAGAATGCAAGGAGTTGAAACATATCATTGAAGATGACTTGCAGAATCAAAACATGTTGAATTCCTTCCCAAAGCTAAAAGTACTTGTTGTAGTAAAGTGCTGCAAGTTGAAATATGTCTTTCCGGTCTCCATATGTAAAGAGTTTCTTGAGCTAGAGGCACTAGTAATAACAAAAGCACTTGAATTGGAGGAAATATTCAAAAGTGAAGGTGATCAAAAAGTCAAGATTCCAAAACTAAATTTTATAGTATTTGACAAACTACCAAGCCTCTTCTTCACCCAAGGAATTCAATTTCAGACAACAAAAAATCGTTTTGTACGAAATTGTCGAAAACTCTCTTCGTGTTTAGAATCTACTCCCTACAAGATCGTTGAAATTTATAAATTTTTCGTACGAAACACAGATCGTGAAACATATAAAAACGTATTTCAACAATTACAAGAAGAGTCCGATGGTAGCGATAGTGGTAATGAAAGTCCAAGTGCAGAAACCACTGAAGATTTTGATGGTGGGATTGAAGTTGAAGCGGCATCACAGATACAAATGAAACTCACACCAGAAGCAGAGCATGAATTTGTTGAAAATGTTCCGGATTTAGAGATACCATCAATAGCAATATTACCAACAAATTCAAAAGAGTTGGTGAATGAACAATCAACGAATCAACAGTGCTTGATGAACCAGCAACATCCACTTGGAGAAATTGATACTACCGCCAAACCTTCTCAAGGAAATAATTGTTTGAAAGAAATAGAGGACCAAAATATTCAAGAGGGTTATACACCAGAAAAAACTGTTGCTGCAACTATGTCTACCATTTCAGAAACGAGAAATGGACCTATACAATTAATTTCTCCTAAAAAAAAGTGTGTTGAAGAAGGAACTGCATTAGCAAATGCCAACACAATAACACCCTCAACTCATTTAGAATTAGTCAATTCATCAAAGGAACAAGATGTTGATGTTAGATACTCTGTGGAAACTGCCAAGACTAATGATGATCAAGTTTCTCTAAATGATGCTGCTGTTGGGAAAGTAACCTCAACTATTGAGGAACAGTTTCCTAAGGATGATGAATTTAGAGTTTCAAAATCTAAGCCCTCTCCAAGCAATAGCATTCCTTTGCCTCTTGCATTTCAGACTCCTTCCACGCCTTCTAAAGGGAACCCTTCTCAAATAGTGAAAGATTTAAGTTCTCCTTCTCTTGTCACAAGGGAGCTTGAGGAACTGGTATCCAAGAAGCATTTGGATTACCAAAACTTGTCTTTGTTGACTGATTTTCTTGTTAAGCATCCTTCATGTCTTTTAAGGGACACCTCACTTAGTAACCGATACAAGGGTTATGCATATCACTGCCTAGCTGAGCTATTGAAATTCCTCCAAACCCGCAGTGTGTTGGATGTTTTAGGTTCAGGCCACTCTGTATTTGTTGAGTTAATACAAGATGCGCGCAGATTTGCTTTTGATAAGAATTGGTTGGATGGTGTCGAAAAGCGCGCTTTGTTTCCCGATTTGCAATTCTCTCAAGATGCATTCCAAAAGTTATTGGATTCCAAGAAACAGGTTACCAAGGATGTTGAAGATATGCGTTGGAAGATTGACGTTTTAGCTAAACAAATGGATGTTTTTAACCATCAATTGACCTCATCTGAAGCTGTTTTGGAGAGTATCATTCAACAGGAGACACAAATTTTAGAAACTAAGGCTGCTTTAAGTGCCCCTCTTGGCTATTAG 5667 0.3552 MVSCLAELGKTYVEKLINRVTAELRFVFCFTCIAKEFEEKKPELEAERKTMEQRVQVAVSEGKVIRANVLHWIKKVDKLIQENTKTKQTCFFGFCPDCIGRYKRGKELVNMTEEIKSSIEKGEIFEIIDLPQSLPGCGYYSLDYYIQFKGRESKYKELLDALKDDNNYMTGLQGMGGTGKTTLAIKVGKELEESKKLDHVIDTTVSFTPDIKKIQDDIAGPLGLKLKDCNNSDRPKILRSRLTNGEKILLILDDVWDQDTSLDFDRIGIPKRDNHNGCRVLITTRSKRILDTMNCDKKIELEILSDEDAWIMFKNYAGINDSFSNSLTSKGQKIARECKGLPVAIAVIARSLKGQQHRKHEWDATLKSLKKHVSMPNVDDDVVGIYKCLKFSYDYMKNKKAKELLLLSSVFPEDEIISVEILTRLGIGMGLFGEDYRSYNDTRIEVVVAKNKLIDSCLLLDVVDTENKENVKMHDLVRDAAQWIANKEIWDVNLSIKDQKLLVQKEINIKYLFCKGKDMDLFSCKFECSKLETLIVDIDSEGQECIEVPNSFFENIFKLRVLYFKSTDKVNFLSLPQSIQSLTNIRSLLVEGVDLGDISILGKLPSLETLDLNLCTINELPFEITKLGKFKLLNLDTCVIRRNNLFEVIEKCSSLEELYFKYSFNNFCREITIPELQKFHIYNDWGRMKYSQSKYVNFCASDACYFSETTLNYFMRTTEFLRLKGIKRGWRNLMPEIVPIDLGMNDLVELHLSSISQLQCLIKTIGSQVPNVLSKLVVLSLDMMENLEELFNGSLSFDSLKNLERLSVMECKKFQRFFNCKLNLCNLKTLILKQCPMLVSLFPLMSQNLVQLEKLEITDCEELKNIIDVKREEESREEIDDGDNDNKRHGSIFPKLKVLDIEGCHRLESIIPFLSSQDFPVLEAISIKRCDGLKYIFSQYQHVELKSLKQMELFLLPSFIDIFPKCYDSMSLLVNESCSTSRDGFKAQIQLDPIKCNIFSWPYLCCRGDKFGSSSTTRIPLVSEDQPQEYSITSVSNSHNLHIWERAQCLSVHPHFMCNIKNIVLFQILKIKSVFILSVAPRMLETLTITNCDELKHIVIDTEDHDSSGNNWGNVFPTLKRLHVQKCMQLEYIFGHYTNDHQNHTEIHLHLPALQYLNICNLSSLVAMCPKQYRPTFPSLKELELKNCSQVDIKSIGDFIIHSVSKSQDSTIMKELSVKHFIPLESLRVDNFKAENLFCLNEMDGQPMNLRLQKIQLSDMHNMKYLFGGPKNSFVLKNLTKIIIIRCEILEVLFSTSIIRCLSKLVFLRIEECKELKHIIEDDLQNQNMLNSFPKLKVLVVVKCCKLKYVFPVSICKEFLELEALVITKALELEEIFKSEGDQKVKIPKLNFIVFDKLPSLFFTQGIQFQTTKNRFVRNCRKLSSCLESTPYKIVEIYKFFVRNTDRETYKNVFQQLQEESDGSDSGNESPSAETTEDFDGGIEVEAASQIQMKLTPEAEHEFVENVPDLEIPSIAILPTNSKELVNEQSTNQQCLMNQQHPLGEIDTTAKPSQGNNCLKEIEDQNIQEGYTPEKTVAATMSTISETRNGPIQLISPKKKCVEEGTALANANTITPSTHLELVNSSKEQDVDVRYSVETAKTNDDQVSLNDAAVGKVTSTIEEQFPKDDEFRVSKSKPSPSNSIPLPLAFQTPSTPSKGNPSQIVKDLSSPSLVTRELEELVSKKHLDYQNLSLLTDFLVKHPSCLLRDTSLSNRYKGYAYHCLAELLKFLQTRSVLDVLGSGHSVFVELIQDARRFAFDKNWLDGVEKRALFPDLQFSQDAFQKLLDSKKQVTKDVEDMRWKIDVLAKQMDVFNHQLTSSEAVLESIIQQETQILETKAALSAPLGY 1888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00163 1888 Pfam NB-ARC domain 156 394 IPR002182 GO:0043531
Car05g00163 1888 MobiDBLite consensus disorder prediction 1676 1706 - -
Car05g00163 1888 Gene3D - 392 483 IPR036388 -
Car05g00163 1888 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 398 IPR027417 -
Car05g00163 1888 Gene3D Ribonuclease Inhibitor 714 881 IPR032675 -
Car05g00163 1888 Gene3D - 141 300 IPR027417 -
Car05g00163 1888 PANTHER - 1172 1391 - -
Car05g00163 1888 PANTHER - 101 966 - -
Car05g00163 1888 Gene3D Ribonuclease Inhibitor 494 700 IPR032675 -
Car05g00163 1888 Gene3D Ribonuclease Inhibitor 893 1461 IPR032675 -
Car05g00163 1888 MobiDBLite consensus disorder prediction 1666 1706 - -
Car05g00163 1888 Gene3D - 304 391 IPR042197 -
Car05g00163 1888 SUPERFAMILY L domain-like 472 954 - -
Car05g00163 1888 Coils Coil 34 61 - -
Car05g00163 1888 CDD AAA 149 284 - -
Car05g00163 1888 PRINTS Disease resistance protein signature 169 184 - -
Car05g00163 1888 PRINTS Disease resistance protein signature 242 256 - -
Car05g00163 1888 PRINTS Disease resistance protein signature 338 352 - -
Car05g00163 1888 PRINTS Disease resistance protein signature 891 907 - -
Car05g00163 1888 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 101 966 - -
Car05g00163 1888 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 1172 1391 - -
Car05g00163 1888 SUPERFAMILY L domain-like 1049 1379 - -
Car05g00163 1888 MobiDBLite consensus disorder prediction 1457 1475 - -
Car05g00163 1888 MobiDBLite consensus disorder prediction 1457 1480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00163 Car-Chr5 3700248 3708553 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00163 170 589 WRKY Transcription Factor Family AT5G45050 24.439 5.54e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00163 - - cam:101507086 2301.94