Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00161 ATGGAGAGTTGCTTGGCTGAATTGGGGAAGACATATGTGGAAAAATTGATAAATAGGGTAACAGCAGAATTACGTTTTGTATTTTGCTTCACATGCATTGCTAAGGAATTCGAAGAAAAAAAACCTGAGTTGGAAGCTGAAAGAAAAACTATGGAGCAACGTGTTCAAGTAGCAGTAAGTGAAGGTAAAGTCATTCGGGCTAATGTTCTTCATTGGATAAAGAAAGTTGATAAGCTGATTCAAGAGAACACCAAAACAAAACAAACATGTTTTTTTGGATTTTGTCCTGATTGCATAGGGCGATATAAAAGGGGAAAGGAGTTGGTAAATATGACAGAGGAGATTAAATCGTCAATAGAAAAGGGAGAAATATTTGAAATTATTGATCTTCCTCAATCTCTTCCAGGTTGTGGTTATTATTCATTGGACTATTACATTCAATTTAAAGGCAGAGAGTCAAAATACAAAGAACTATTGGATGCACTAAAAGATGACAACAACTATATGACCGGATTGCAAGGGATGGGGGGCACCGGAAAAACTACATTGGCCATAAAAGTGGGTAAAGAACTAGAGGAATCTAAAAAACTCGATCATGTCATTGATACAACAGTGTCATTTACTCCTGATATAAAAAAGATTCAAGATGATATTGCTGGACCTCTAGGATTGAAATTCAATGATTGTAATAACTCAGACCGACCCAAAATACTAAGGAGCAGATTAACAAATGGTGAGAAAATTCTTCTTATTCTGGATGATGTGTGGGATCAAGACACCTCTCTTGATTTTGATAGAATAGGAATTCCAAAACGAGACAATCACAATGGTTGCAGAGTTCTTATAACCACACGTAGTAAACGAATACTCGATACAATGAATTGTGATAAGAAAATTGAATTGGAGATCTTATCTGATGAAGATGCATGGATCATGTTCAAAAATTATGCCGGTATAAACGATAGTTTTTCAAATAGTTTGACCAGTAAGGGACAAAAAATTGCTCGCAAATGCAAAGGATTACCGGTTGCAATTGCAGTAATTGCCAGAAGTTTAAAGGGCCAACAACATCGCAAGCATGAGTGGGATGCGACCTTGAAATCCTTGAAGAAGCATGTGTCCATGCCTAATGTTGATGACGATGTGGTTGGAATTTATAAATGTTTGAAGTTTAGCTATGATTATATGAAGAATAAAAAAGCCAAGGAATTGCTCCTCTTATCTTCTGTATTCCCAGAAGATGAAATAATTTCTGTTGAAATTCTAACTAGACTTGGCATTGGAATGGGCCTTTTTGGGGAGGATTATCGCAGCTACAATGATACCCGAATCGAAGTAGTTGTTGCCAAAAATAAACTCATAGATTCTTGTTTGTTGTTGGATGTCGTTGATATCGAAAACAAAGAAAATGTCAAAATGCATGATTTAGTTCGTGATGCGGCTCAATGGATTGCGAACAAAGAGATTTGA 1470 0.3619 MESCLAELGKTYVEKLINRVTAELRFVFCFTCIAKEFEEKKPELEAERKTMEQRVQVAVSEGKVIRANVLHWIKKVDKLIQENTKTKQTCFFGFCPDCIGRYKRGKELVNMTEEIKSSIEKGEIFEIIDLPQSLPGCGYYSLDYYIQFKGRESKYKELLDALKDDNNYMTGLQGMGGTGKTTLAIKVGKELEESKKLDHVIDTTVSFTPDIKKIQDDIAGPLGLKFNDCNNSDRPKILRSRLTNGEKILLILDDVWDQDTSLDFDRIGIPKRDNHNGCRVLITTRSKRILDTMNCDKKIELEILSDEDAWIMFKNYAGINDSFSNSLTSKGQKIARKCKGLPVAIAVIARSLKGQQHRKHEWDATLKSLKKHVSMPNVDDDVVGIYKCLKFSYDYMKNKKAKELLLLSSVFPEDEIISVEILTRLGIGMGLFGEDYRSYNDTRIEVVVAKNKLIDSCLLLDVVDIENKENVKMHDLVRDAAQWIANKEI 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00161 489 Gene3D - 141 301 IPR027417 -
Car05g00161 489 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 13 487 - -
Car05g00161 489 Gene3D - 392 483 IPR036388 -
Car05g00161 489 Coils Coil 34 61 - -
Car05g00161 489 PANTHER - 13 487 - -
Car05g00161 489 CDD AAA 149 284 - -
Car05g00161 489 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 398 IPR027417 -
Car05g00161 489 Gene3D - 304 391 IPR042197 -
Car05g00161 489 PRINTS Disease resistance protein signature 169 184 - -
Car05g00161 489 PRINTS Disease resistance protein signature 242 256 - -
Car05g00161 489 PRINTS Disease resistance protein signature 338 352 - -
Car05g00161 489 Pfam NB-ARC domain 156 394 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00161 Car-Chr5 3668344 3669813 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00161 170 488 WRKY Transcription Factor Family AT5G45050 27.879 3.14e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00161 - - cam:101509080 970.689