Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00157 ATGGCGGAGGTAATTAACTTACCTCCCGAATCTCACGACCGATCTCCAATTACCGCCGCTCCTCCTCCTCCCGACGACGATCTCCCACCTCCGCCTCTCCCTCGTCGCAGAGACCATCGTGACGACAGGGATTTCGACCGCCGTCCTCACCGTGGTGGCCGAGGTGGCGGACGGGGTGGTTACTACAATCGTGATAGAGATGTCAAGCGCCGTCGTAGTCCTAGCCCTAACCACCGTGACCGCAGATATTctcctcctccgcctcgacgttctcctcctcctTATAAGCGACCAAGACGGGGTAGTCCTCATGGACCTGATGACAGATTTGGTTATGATCACTTTGGTGGCTATGAACGTGGAGTGGGTGGAAGGCCTGGTTATGCAGATGAGAAGCCTGGTGGCAGGTTTGCACATCGACCTGGAAGGGCCGGATATCGAAATGGAATTGCTGATCTGGATGCCAACCGTGGCTATGGAGATTTGCCAAGTGGGGGTGCACGAAGAGAGGGGTTGATGTCCTATAAGCAATTCATTCAGGAGCTTGAAGATGATATACTGCCCTCTGAAGCTGAGCGTAGATACCAAGAGTACAAATCAGAGTATATTTCTACACAAAAACGAGCTTATTTCAATGCTCACAAGGGTGAGGAATGGTTGAAAGATAAATATCATCCAACAAACTTACTTACGGTAATTGAAAGGAGGAATGAAAATGCTCGACGCCTGGCAAAGGATTTTTTGCTTGATTTGCAAAGTGGAACACTAGACCTAAATCCAGGTTTAAACTCCACTGCATCTATTAGATCAGAGCAAGCCAGTGAGCCAAATTCAGAGGAGGAAACAGATGCCGGTGGTAAACGAAGAAGATATGGCAGGGGATCTAATAAGGATAGTGATTTCTCAGCTGCTCCAAAAGCTCACCCTGTCAGTTCTGAACCTAGAAGGATACAAGCCGATATTCAACAGGTTCAGGCTGTTGTTCGTAAACTTGACAAGGAAAAAGGGATTGAAGATAATATTTTATGTACCAGTGATCACAACAAAAATGGTGATAAGGCTCACAGTGGATCTGTGGGCCCTGTAATAATTATCCGTGGCCTAACATCTATCAAGGGCTTAGAGGGTGTTGAGCTACTGGATACACTTATAACATACCTTTGGCGGATTCATGGTGTAGATTATTATGGAATGCTTGAGACTAACGAGGCCAAGGGTTTTAGGCATGTGAGACCAGAAGGAGCAAGGCATGAAGAAACAGGTAAATTGGGGTCAGAATGGGAGACAAACCTTGATTCATTTTGGCAGAGAAGGTTGGATGGCCAGGATCCATTGGAAGTAATGACTGCAAAGGAGAAGATAGATGCTGCAGCAGCTGATGTGTTGGATCCACATGTTAGAAAAATTAGGGATGAAAAGTATGGATGGAAGTATGGTTGTGGAGCCAAGGGTTGCACAAAGCTTTTTCATGCGGTTGAGTTTGTGTACAAACATCTCAAGCTAAAACACACAGAGCTTGTTTTGGAACTAACATCCAAATTGCGTGAAGATCTTTATTTTCAAAATTACATGAATGATCCTGTTGCTCCTGGTTCAATGCCTGTCATGCAGCAACCTCAGAAGGACACCTCTTTAAAGAGAAGATTATTGGATGGCCGGTTGAAAGATGACCGGGGGAATCGGCGAGACCAGGATAGGAATGACAGAACAAATGGAGATAGGCCTGACAGTTCCCCATCCCGTGAAAAGCAGTTGGGAAACCGTGATGAAACGATGTATGATACATATGGAGGGCCTGCTTTACCTCCATTCAACTCAGATATGCCCCCTCCTCCAGTTTTGATGCCTGTACCTGGCGCTGGGCCTTTGGGACCCTTTGTTCCTGCTCCACCAGAAGTTGCCATGCAGATGTTTAGGGATCAAGGATCATCTTCATTTGATCCATCAGGAATGATGATGCGTGCTGGTCCTCACATGGGGGGACAGGCCTCTATAATTGCTGTTCCTCCAGCCTTTAGATCCGATCCTCGACGGATGCGAAGTTATCAAGATTTGGATGCCCCAGAAGAAGAAGTTACTGTCATAGACTATCGGAGCTTGTAG 2103 0.4598 MAEVINLPPESHDRSPITAAPPPPDDDLPPPPLPRRRDHRDDRDFDRRPHRGGRGGGRGGYYNRDRDVKRRRSPSPNHRDRRYSPPPPRRSPPPYKRPRRGSPHGPDDRFGYDHFGGYERGVGGRPGYADEKPGGRFAHRPGRAGYRNGIADLDANRGYGDLPSGGARREGLMSYKQFIQELEDDILPSEAERRYQEYKSEYISTQKRAYFNAHKGEEWLKDKYHPTNLLTVIERRNENARRLAKDFLLDLQSGTLDLNPGLNSTASIRSEQASEPNSEEETDAGGKRRRYGRGSNKDSDFSAAPKAHPVSSEPRRIQADIQQVQAVVRKLDKEKGIEDNILCTSDHNKNGDKAHSGSVGPVIIIRGLTSIKGLEGVELLDTLITYLWRIHGVDYYGMLETNEAKGFRHVRPEGARHEETGKLGSEWETNLDSFWQRRLDGQDPLEVMTAKEKIDAAAADVLDPHVRKIRDEKYGWKYGCGAKGCTKLFHAVEFVYKHLKLKHTELVLELTSKLREDLYFQNYMNDPVAPGSMPVMQQPQKDTSLKRRLLDGRLKDDRGNRRDQDRNDRTNGDRPDSSPSREKQLGNRDETMYDTYGGPALPPFNSDMPPPPVLMPVPGAGPLGPFVPAPPEVAMQMFRDQGSSSFDPSGMMMRAGPHMGGQASIIAVPPAFRSDPRRMRSYQDLDAPEEEVTVIDYRSL 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00157 700 MobiDBLite consensus disorder prediction 60 86 - -
Car05g00157 700 MobiDBLite consensus disorder prediction 1 143 - -
Car05g00157 700 MobiDBLite consensus disorder prediction 259 318 - -
Car05g00157 700 ProSitePatterns Zinc finger C2H2 type domain signature. 480 503 IPR013087 -
Car05g00157 700 MobiDBLite consensus disorder prediction 30 53 - -
Car05g00157 700 MobiDBLite consensus disorder prediction 544 589 - -
Car05g00157 700 MobiDBLite consensus disorder prediction 259 273 - -
Car05g00157 700 MobiDBLite consensus disorder prediction 529 602 - -
Car05g00157 700 Pfam SERRATE/Ars2, N-terminal domain 176 258 IPR021933 -
Car05g00157 700 MobiDBLite consensus disorder prediction 100 115 - -
Car05g00157 700 MobiDBLite consensus disorder prediction 15 29 - -
Car05g00157 700 Pfam Arsenite-resistance protein 2 421 599 IPR007042 -
Car05g00157 700 MobiDBLite consensus disorder prediction 274 296 - -
Car05g00157 700 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 1 700 - -
Car05g00157 700 PANTHER ARSENITE-RESISTANCE PROTEIN 2 1 700 IPR039727 GO:0006397
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00157 Car-Chr5 3528829 3539323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00157 78 700 C2H2 Transcription Factor Family AT2G27100 62.500 0.0 726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00157 05 3528829 3539323 Car05g00157 05 3528829 3539323 ECH