Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00152 ATGCAAGAAGAGTCACTTAACTATCCACGGTACACCCCATTACTCCCCCTTCACATTCATTTTCTATTTCATCTCGCTTCTCTCTGTCTCTTCTATACCCAAACGGCAACACCGTCGTTGCCACCGTCGTATTCCAGTCGCCGGCGTCGTAACCTCCGCTTTTCGGGTTCCCTCCTATTTGAGAACCTTGCAAAAATGATTCTTGACAAGTTTGACATTGAGGAAACTCATTATGAGGTTCTGAATGTCAAGGAAGATGCAGATTACGAAGAGATTCGTGCTAGTTACCGAAGTGCTGCTCTCAGTTTACATCCCGATAAGCTATTGAAGACATTTGATACAACTAGCAGTAATCAAACAACTACAGATAGATTTCTCAAAGTACAAAAGGCATGGGAAATTCTAAGTGATTCAAGCTCTCGTTTGTTTTATGATAAGGAGCTTCAAAGTTCAAGGCGAGATGTAATGGCTGCTGAAGTTGCAGAAGATTTAACATTACAGGATATGTCAGCTGAAGATGCCGATGAAGTATTAGAATTGTTTTATCAGTGCCGATGTGGTGATTATTTCTCTTTGGACTCGTCAGAATTGTTGAAAATGGGCTATTCCTTGTTGAGAGATGGAAGGAGCATATCAATAAGCAATGGTGATACTTTACCAGGATCAGTTATTCTTCCTTGTGGATCTTGTTCATTAAAAGCTCGTCTGGTACTCAATATGGATAATAACCATTGA 735 0.4054 MQEESLNYPRYTPLLPLHIHFLFHLASLCLFYTQTATPSLPPSYSSRRRRNLRFSGSLLFENLAKMILDKFDIEETHYEVLNVKEDADYEEIRASYRSAALSLHPDKLLKTFDTTSSNQTTTDRFLKVQKAWEILSDSSSRLFYDKELQSSRRDVMAAEVAEDLTLQDMSAEDADEVLELFYQCRCGDYFSLDSSELLKMGYSLLRDGRSISISNGDTLPGSVILPCGSCSLKARLVLNMDNNH 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00152 244 Gene3D DPH Zinc finger 157 244 IPR036671 -
Car05g00152 244 PRINTS DnaJ domain signature 96 111 IPR001623 -
Car05g00152 244 PRINTS DnaJ domain signature 120 140 IPR001623 -
Car05g00152 244 PRINTS DnaJ domain signature 78 96 IPR001623 -
Car05g00152 244 SMART dnaj_3 75 140 IPR001623 -
Car05g00152 244 CDD DnaJ 76 137 IPR001623 -
Car05g00152 244 Pfam CSL zinc finger 164 237 IPR007872 -
Car05g00152 244 ProSiteProfiles DPH-type metal-binding (MB) domain profile. 160 239 IPR007872 -
Car05g00152 244 ProSiteProfiles dnaJ domain profile. 76 148 IPR001623 -
Car05g00152 244 SUPERFAMILY CSL zinc finger 161 242 IPR036671 -
Car05g00152 244 SUPERFAMILY Chaperone J-domain 65 144 IPR036869 -
Car05g00152 244 Pfam DnaJ domain 76 145 IPR001623 -
Car05g00152 244 PANTHER DPH3 HOMOLOG-RELATED 66 241 IPR044248 GO:0017183|GO:0046872
Car05g00152 244 PANTHER DIPHTHAMIDE BIOSYNTHESIS PROTEIN 4 66 241 - -
Car05g00152 244 Gene3D DnaJ domain 71 156 IPR036869 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00152 77 145 C2H2 Transcription Factor Family AT1G74250 42.029 4.02e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00152 K17867 - gmx:100814856 274.633