Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00149 ATGGATTCTAAGAGGCCACTTTTGTTACAATCTCCAAGAACACCAAATGATCAAGAATTTCCAACAATTCCAACTTTTCCTGAGCTACCAAAATCAAAGTCAAGTTCAAGTAACACAGTAACATTTTCTGGTGTGGAAAATTACCAAGTTGAGAAAAACAACAACTCTTTAAACTCATCATCATCAAGTAGAACTACTATGTCAATTCATTCCATTCATTCAAGCAGTAGAAACAATTCTGTGAAAGAAATTAGTAGTTTAAGTCATTCAGGTTCAAAGTTCATGAGGTATGGTTCAAAAGGTGGTTTTGATTCAGAAGGATTAAGCATGTCACAAAGAGAACTTAGAGATGAAGATGCAAGATTGGTTTACATAAATGATCCTGAAAAAACCAATGAGAATTTTGAATTCTCAGGAAATTCGATCCGAACTGCGAAATACTCGATTCTCACTTTCGTTCCGAGGAATTTGTTTGAACAGTTTCATAGAGTTGCTTATGTTTATTTTCTCATCATTGCTATTCTCAATCAACTTCCTCAACTTGCTGTTTTTGGAAGAGGTGTTTCAATTTTACCATTAGCTTTTGTTCTTTTTGTTACTGGTGTGAAAGATGCTTTTGAAGATTGGAGAAGACATAATTCAGATAAAGTTGAGAATAACAGGTTAGCATCAGTTTTGGTTAATGATAGTTTCATAGAGAAAAGTTGGAAAGATATTAAAGTTGGTGAAATTGTGAAAATCAAAACAAATGAAACAATTCCTTGTGACATTGTTTTGTTATCAACTAGTGATCCAACTGGTGTTGCTTATGTTCAAACTATTAATCTTGATGGTGAGTCAAATTTGAAGACTAGGTATGCGAAACAAGAGACAGGTTCAAAGGTTCAACAGAGGTTTCATGGTCTCATTAAGTGTGAGAAACCTAATAGGAATATATATGGATTTATGGCAAATATGGAAATTGAGGGTAAGAAGTTATCACTTGGATCTTCTAATATTGTTCTTAGAGGATGTGAGCTCAAGAATACTAGTTGGGCGCTTGGTGTCGCGGTCTATTGTGGCCGCGAGACTAAAGCTATGCTCAACAGTTCTGGAGCTCCATCGAAGAGAAGTAGGTTAGAGACGCGGATGAATCAAGAAATTATTATGCTCTCATTCTTTCTTGTGGCATTGTGTACAATTACTTCTGTTGGTGCTGCGGTTTGGTTAAGGCGCCATAAGGATGAGTTGAATCTGTTGCCTTATTATAGGAAACTCGATTTTTCGGAGGGGAAAGTTGATGATTATAAGTACTATGGTTGGGGATTGGAGATATTTTTCACATTTCTTATGTCAGTTATAGTTTATCAGGTCATGATTCCTATTGCGTTGTATATTTCGATGGAGCTTGTTCGCGTTGGCCAGGCCTATTTCATGATCGAAGACGATCGATTGTATGATGAAGCTAGTAATTCAAGGTTTCAATGCAGGGCTTTGAATATTAATGAAGATTTGGGACAAATTAAGTATGTGTTCTCAGATAAAACTGGTACACTTACTGAGAATAAGATGGAGTTTCAATGTGCTAGCATTTGGGGAGTTGATTATAGTTCAACTAAAGGTGGCATGGAGAGTGAACAAGGTGAATTCTCAGTGCAAGTTGATGGAAAGGTGTTGAAACCAAAGATGAAGGTGAAAGTTAATCCAGAGCTTTTGCAATTGGCAAGATCAAGTGGACTTGAAAATAAAGAAGGGAAAAGAATTTATGATTTCTTTCTAGCACTTGCAACCTGCAATACTATTGTGCCTCTTGTTGTTGACACACCTGATCCTGATGTCAAGTTGTTAGATTATCAAGGAGAATCACCAGATGAACAAGCATTGGCGTATGCCGCGGCGGCCTATGGCTTTATGCTTATCGAACGAACCTCGGGTCACATAGTCATTGATATTCATGGAGAAAGACTAAAGTTCAATGTCTTAGGTTTACATGAATTTGACAGTGACAGAAAAAGAATGTCAGTCATATTAGGCTACCCTGACAATTCATTCAAACTTTTTGTCAAAGGAGCAGACACAACAATGTTTAATGTGATAGACAAATCACACAACATAAACTTAATAAAATCCACAGAAAATCATCTTCACTCATATTCCTCCCTTGGTTTAAGAACACTTGTCATAGGAATGAGATCACTAAATCATTCAGAGTTTGAACAATGGCACGCAGCTTATGAAGCAGCAAGCACTGCTGTTTTTGGAAGGGCTGCAATGTTGAAGAAAATCTCAAACAATGTTGAAACCAATGTTTGCATATTAGGAGCTTCTGCTATTGAAGATAAACTTCAAAAGGGTGTTCCAGAAGCTATTGAATCATTAAGGAATGCTGATATTAAAGTTTGGGTGTTAACTGGTGATAAACAAGAAACTGCTGTGTCAATTGGTTTTTCATCAAAGCTTTTGACAAGAAACATGACACAAATTGTTATTAATAGTAACAGTAAAGTTTCTTGTAGAAAAAGTTTGAAAGATGCACTTGAAAGGTCTAGAAAACTTGTTGATGATGATGATGCAAGTTCAACACAAATTGCTTTGATTATTGATGGTGGAAGTCTTGTACATATTCTTGATAGTGAACATGAAGAAGAGCTATTTCAACTTGCAAGTTTGTGTTCTGTTGTTCTTTGTTGTCGAGTGGCTCCACTGCAAAAAGCTGGTATTGTTTCACTTGTGAAGAATAGAACATCTGATATGACACTAGCCATTGGAGATGGTGCTAATGATGTGTCAATGATTCAAATGGCTGATGTTGGAGTTGGTATAAGTGGACAAGAGGGTAGACAAGCAGTAATGTCATCAGATTTTGCAATGGGGCAATTTAGGTTTTTAGTTCCTCTCTTATTGATACATGGTCATTGGAATTACCAAAGGCTTGGTTACATGATTCTATACAACTTTTACAGAAATGCTGTCCTTGTTCTTGTCCTGTTTTGGTATGTACTCTTCACTGCCTTTACATTAACAACAGCAATAAATGAATGGAGTTCAACATTATACTCAATAATCTACAGTGCACTACCAACAATCATTGTTGGAATCCTTGACAAAGATCTTGGTAGAAGCACTCTCCTAAAATACCCTCAACTATATAGTGCTGGCCAAAAAAATGAAGCATACAACAAGAAATTGTTTATATTAACAATGATTGATACATTATGGCAAAGTATGGTTATTTTTTGGTTTCCACTATTTGCATATTGGAAAAGTACTATTGATGTGGCAAGCATTGGTGATCTTTGGACACTTGCAACTGTTATTTTGGTTAATTTGCATTTGGCTATGGATGTTGTTAGATGGTATTGGTTGACACATGCTGTTATTTGGGGATCTATTTTTGCTACTTTTGTTTCTGTTATGATCATTGATGCTATTCCTCAACTTCCTGGTTACTGGGCCTTCTTTCATGTTGCAAGCACTAGATTGTTTTGGTTATTGTTGCTTGGAATTGTGATAGCAGCATTGCTTCCACGTTTGGTTGTAAAATTTGTTTACCAATATTATTTTCCTAGTGATATTCAAATTTCTAGAGAAGCTGAAAAAATGAGACAATATCAGAGAATTGTTGAAAGTGGACAAATAGAAATGCTTCCTGTCTCAGATCTTCAACATAGATAA 3654 0.3593 MDSKRPLLLQSPRTPNDQEFPTIPTFPELPKSKSSSSNTVTFSGVENYQVEKNNNSLNSSSSSRTTMSIHSIHSSSRNNSVKEISSLSHSGSKFMRYGSKGGFDSEGLSMSQRELRDEDARLVYINDPEKTNENFEFSGNSIRTAKYSILTFVPRNLFEQFHRVAYVYFLIIAILNQLPQLAVFGRGVSILPLAFVLFVTGVKDAFEDWRRHNSDKVENNRLASVLVNDSFIEKSWKDIKVGEIVKIKTNETIPCDIVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETGSKVQQRFHGLIKCEKPNRNIYGFMANMEIEGKKLSLGSSNIVLRGCELKNTSWALGVAVYCGRETKAMLNSSGAPSKRSRLETRMNQEIIMLSFFLVALCTITSVGAAVWLRRHKDELNLLPYYRKLDFSEGKVDDYKYYGWGLEIFFTFLMSVIVYQVMIPIALYISMELVRVGQAYFMIEDDRLYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSSTKGGMESEQGEFSVQVDGKVLKPKMKVKVNPELLQLARSSGLENKEGKRIYDFFLALATCNTIVPLVVDTPDPDVKLLDYQGESPDEQALAYAAAAYGFMLIERTSGHIVIDIHGERLKFNVLGLHEFDSDRKRMSVILGYPDNSFKLFVKGADTTMFNVIDKSHNINLIKSTENHLHSYSSLGLRTLVIGMRSLNHSEFEQWHAAYEAASTAVFGRAAMLKKISNNVETNVCILGASAIEDKLQKGVPEAIESLRNADIKVWVLTGDKQETAVSIGFSSKLLTRNMTQIVINSNSKVSCRKSLKDALERSRKLVDDDDASSTQIALIIDGGSLVHILDSEHEEELFQLASLCSVVLCCRVAPLQKAGIVSLVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVPLLLIHGHWNYQRLGYMILYNFYRNAVLVLVLFWYVLFTAFTLTTAINEWSSTLYSIIYSALPTIIVGILDKDLGRSTLLKYPQLYSAGQKNEAYNKKLFILTMIDTLWQSMVIFWFPLFAYWKSTIDVASIGDLWTLATVILVNLHLAMDVVRWYWLTHAVIWGSIFATFVSVMIIDAIPQLPGYWAFFHVASTRLFWLLLLGIVIAALLPRLVVKFVYQYYFPSDIQISREAEKMRQYQRIVESGQIEMLPVSDLQHR 1217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00149 1217 SFLD Haloacid Dehalogenase 489 966 - -
Car05g00149 1217 Gene3D - 762 955 IPR023214 -
Car05g00149 1217 Gene3D - 612 743 IPR023299 GO:0000166
Car05g00149 1217 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 9 1217 - -
Car05g00149 1217 SUPERFAMILY Calcium ATPase, transduction domain A 220 359 IPR008250 -
Car05g00149 1217 Pfam E1-E2 ATPase 223 463 - -
Car05g00149 1217 Pfam Phospholipid-translocating P-type ATPase C-terminal 943 1183 IPR032630 -
Car05g00149 1217 ProSitePatterns E1-E2 ATPases phosphorylation site. 507 513 IPR018303 -
Car05g00149 1217 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 511 779 IPR023299 GO:0000166
Car05g00149 1217 CDD P-type_ATPase_APLT_Dnf-like 139 1075 - -
Car05g00149 1217 Pfam Cation transport ATPase (P-type) 611 689 - -
Car05g00149 1217 PRINTS P-type cation-transporting ATPase superfamily signature 505 519 - -
Car05g00149 1217 PRINTS P-type cation-transporting ATPase superfamily signature 789 799 - -
Car05g00149 1217 PRINTS P-type cation-transporting ATPase superfamily signature 915 934 - -
Car05g00149 1217 Gene3D - 202 362 - -
Car05g00149 1217 MobiDBLite consensus disorder prediction 1 83 - -
Car05g00149 1217 SUPERFAMILY HAD-like 492 956 IPR036412 -
Car05g00149 1217 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 137 1190 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Car05g00149 1217 MobiDBLite consensus disorder prediction 28 83 - -
Car05g00149 1217 SFLD p-type atpase 489 966 IPR044492 -
Car05g00149 1217 SUPERFAMILY Calcium ATPase, transmembrane domain M 137 1182 IPR023298 -
Car05g00149 1217 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 885 1001 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Car05g00149 1217 Pfam Phospholipid-translocating ATPase N-terminal 123 188 IPR032631 -
Car05g00149 1217 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9 1217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00149 Car-Chr5 3454976 3461802 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00149 75 1217 Primary Pumps ATPases AT5G04930 69.425 0.0 1675
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00149 K14802 - gmx:100813982 1866.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00149 05 3454976 3461802 Car05g00149 05 3454976 3461802 ECH