Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00135 ATGACAAAGTCAAAGGGTCAAGAAGATTATGGGGTACAATGGGCTTTCCTAATTGCTGGTTCCAAAGGTTATAGAAATTATAGACACCAAGCTGATGTATGTCATGCATACCAAGTATTAAGAATTGGTGGTCTTAAAGATGAAAATATCATTGTTATGATGTATGATGATATTGCTTATAATAAAGAAAATCCACACCCCGGCTATATAGCTAATAAACCCCATGGGATAAATGTTTATTTTAATGTTCCCAAGGATTATACAGGAAAGGATGCAACTAAAGAAAATTTTTACGCAGTGCTTAGCGGAAAAAAAAGTGGTGTTAAGGGAGGTAGTGGTAAGGTGCTGGATACTAACCCAGATGATACCATTTTCATTTTCTTTTCTGGCCATGGTAACACTGGCCTAATAGCTTCCAATCCATTTGAGAATAGTTACGCATTTTACTGTCCAAAGAGGCAAAGTTCTCCACCTCCTCAATATACAGTTTGTTTGGGTAATTTGTACAGCATTTCTTGGCTTGAAGACAGTGAACAAAATGATAGAGAATCTGAATCTTTGAATCAACAATATTTGAAGCCATTGGAAGATGTAGCTGCAAGAGACTCCTTGAAGTTCTTATTTGGTGATTTGAAACAACAAAATAGGAAATTGTCAAGCTTGGACATTGGTGGTGAGATATTGCAAGCAATTGGTGGTTTAAGAAACTTGCAATCCATTTATTCGTGGGATTACATCTTCATCAGACATTTCTACAAAAATAGCTTGAGGTTAGAAGGGAAAAAAATAAGTCAGAGGATGAAGTATTTGCAAGATTTAGTGTCAGGATGCAACAAAATTGCAGGCAAAGCTGAAATGCTTGATGAAATAATTAACTATATGTTTAGTCTCTTCAACTTCAAGTTGAGGTTTGGAACAGAACATTTTATACTGATAAAGACAGATATTCTCACGTCATGCAATATGGAAATATGA 975 0.3538 MTKSKGQEDYGVQWAFLIAGSKGYRNYRHQADVCHAYQVLRIGGLKDENIIVMMYDDIAYNKENPHPGYIANKPHGINVYFNVPKDYTGKDATKENFYAVLSGKKSGVKGGSGKVLDTNPDDTIFIFFSGHGNTGLIASNPFENSYAFYCPKRQSSPPPQYTVCLGNLYSISWLEDSEQNDRESESLNQQYLKPLEDVAARDSLKFLFGDLKQQNRKLSSLDIGGEILQAIGGLRNLQSIYSWDYIFIRHFYKNSLRLEGKKISQRMKYLQDLVSGCNKIAGKAEMLDEIINYMFSLFNFKLRFGTEHFILIKTDILTSCNMEI 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00135 324 PANTHER LEGUMAIN PROTEIN-RELATED 138 219 - -
Car05g00135 324 Pfam Peptidase C13 family 13 137 IPR001096 GO:0006508|GO:0008233
Car05g00135 324 PANTHER HEMOGLOBINASE FAMILY MEMBER 138 219 IPR001096 GO:0006508|GO:0008233
Car05g00135 324 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 262 302 IPR036638 GO:0046983
Car05g00135 324 PIRSF Legumain 247 292 IPR001096 GO:0006508|GO:0008233
Car05g00135 324 PIRSF Legumain 136 222 IPR001096 GO:0006508|GO:0008233
Car05g00135 324 PIRSF Legumain 1 139 IPR001096 GO:0006508|GO:0008233
Car05g00135 324 PRINTS Hemoglobinase (C13) cysteine protease signature 86 101 IPR001096 GO:0006508|GO:0008233
Car05g00135 324 PRINTS Hemoglobinase (C13) cysteine protease signature 14 38 IPR001096 GO:0006508|GO:0008233
Car05g00135 324 PRINTS Hemoglobinase (C13) cysteine protease signature 114 133 IPR001096 GO:0006508|GO:0008233
Car05g00135 324 PRINTS Hemoglobinase (C13) cysteine protease signature 39 68 IPR001096 GO:0006508|GO:0008233
Car05g00135 324 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 247 297 IPR011598 GO:0046983
Car05g00135 324 PANTHER LEGUMAIN PROTEIN-RELATED 9 138 - -
Car05g00135 324 PANTHER HEMOGLOBINASE FAMILY MEMBER 9 138 IPR001096 GO:0006508|GO:0008233
Car05g00135 324 Gene3D - 138 224 - -
Car05g00135 324 Gene3D - 11 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00135 Car-Chr5 3144255 3149633 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00135 257 297 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 70.732 3.91e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00135 K01369 - mnt:21402472 231.491