Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00130 ATGGATATGATTCAGGAGGGAGATGAAAATAGTAAATGTTCAGTTGTTGGTTTAGCAATTAAGGGTAACAAGAAAAGCAAATATGTTGTACAATGGGCACTTGATAAATTTGTTAATGAAGGAGTGATTAGTTTCAAGCTTATACATGTTCGTGCTGTTATAAAAGGAGTTCCAACACCAATGGGAGATGTGCTTCCTCTTTCACAAGTGAGAAATGATGTAGCAACTTCTTTCAAAAGGGAAATTGAGTGGCAAACAAATCATATGCTTCTACCTTTTAAGAGTTTGTGTGAGCATAGAAAGGTTCATGTAGATGTTGTAGTGATTGAATCAGATGAGGTAGCTACTGCAGTAGCAGAGGAAGTAGCTAAGAATTCTATAAACAAACTTGTCCTTGGAGCTTCATCTCCTGGTCTATTTAAAAGTAAACACAAGGGTATGTCTGCAAAAATATCAGTATGCATTCCAAGATTTTGTACAGTTTATGCAGTTTCCAAAGGAAAATTGTCCATACGGCCATCAGACATGGAGATTGATGGAAGCATTATAGATGATACAAGTGAAACCAGTTTTTCCTCCAGCAGCTCATCAAACTACACTTCCACCAATCTTACAGATTCTAGCTCAGTTGCTTCTTCTGCTGCTTTACATTCCTCTTCCCTGCCAACACGACAAATTAAAGCTCTCTCGACTATAAATCATACCTTTCTAAGCACAAGTTCTAGTTTAAATGAAATTAATCATTATAGAGGCCAGTCACTAGATCTTGGGAGAAAACATGTTGCTTCAAGTTCTTCTAGAAACTCAGATATTGACCATATTGCAAGTCAAGCGTCTAGTTGCGGAAGCATTTCAGATAATGAATCTTGGATTTATGATCAAAATTCTGCAAAGTATGTCCCTCAAGTAACTAAACTTCCATCACCAAATAGAGAGGAAAACTTTAACCTTGAGCTGGAAAAGTTGAGAATTGAACTAAGACATGCACAAGGGATGCATGCAGTAGCTCAAAGTGAGAACATTGATGCATCACAAAAGCTGAATGAACTAAACAAGAGAAGAGTAGAAGAATCCATGAAAATGAAGGAGATTATTGCTAAGGAAGAGATGGCAAAGGAGTTAGCAAATCAAGAAAGAGAGAAATATGAAGCTGCAGCAAGAGAAACTGAATATTTGAAACAATGTGCAGGAAGAGAGGCTGCAGAAAGAAGAGAATCAGAGATGAAAGCTACTCATGCTGCCAAAGAGAAAGAAAAGCTTGAGGATGCTCTGAGTGGTTCAACGCCTCAGTACCGTATGTTTACGTGGGAGGAAATAGTTTCAGCTACTTCATCTTTTTCTGAAGATCTGATGATTGGAAAGGGTGCATACGGAATGGTGTATAAGTGCGCTTTGCATCACACAACTGTTGCTGTTAAAGTTCTCCACTCTAATGGAAACCACAAAAGCAAGCAATTCCAACAAGAGTTAGAGATATTGAGCAGAATTTGCCATCCAAACCTGCTTCTTCTTCTTGGTGCATGTCCTGATCATGGATGCCTTGTGTATGAATACATGGAGAATGGTAACTTAGAGGATAAACTATTTCAGAAAAACAGTACAACATCAATCCCATGGTTCGAGAGGTTTCGAATAGCTTGGGAAATTGCGTCAGCTCTTTCCTTTCTTCACAGCTCAAAGCCACAACCTATCATCCACCGTGACTTGAAACCGGCAAACATCTTGCTTGGCCGGAACCTTGTCAGCAAGATTGGTGATATTGGTCTTTCTACAATCCTCAATTCAGATGATTTATCTACCATGTATAAGGACACGGCGCCTGTTGGAACACTATGCTACATTGATCCTGAGTATCAAAGGAGTGGTTTAATATCTCCAAAATCTGATGTTTATGCTTTTGGATTAGTGGTCTTACAGTTATTGACAGCAAAACCAGCAATGGCACTTACAGATATGGTTGAAACAGCGATTGATAATGGTAATTTAGCAGATATATTGGATCCAAAAGCAGGTTCATGGCCACTACAAGAGACACTAGACATAGCTCGGTTAGCATTGAGTTGTGCGGAGCTTCGGCGTAAGGATCGACCTGATTTGAAAGATCATGTGTTACCAATGCTAGAGAGGTTGAAAGAAGTTGCTGATGGGGCTGCTCATTCTGCTTCAATAGTTAATTTAAAATCTAGACCTCCTAACCATTTTATATGCCCAATACTTCAGGATGTGATGGATGATCCTTGTGTTGCAGCAGACGGATATACGTATGATCGCAATGCAATTGAAAAGTGGCTTGAAGAGAATGGTAAATCACCAATGACAAATATGGCTTTACCTCATAAGAATCTAATTCCTAATTACACACTTCTATCTGCAATTTTGGAGTGGAAGTCCTGA 2394 0.3897 MDMIQEGDENSKCSVVGLAIKGNKKSKYVVQWALDKFVNEGVISFKLIHVRAVIKGVPTPMGDVLPLSQVRNDVATSFKREIEWQTNHMLLPFKSLCEHRKVHVDVVVIESDEVATAVAEEVAKNSINKLVLGASSPGLFKSKHKGMSAKISVCIPRFCTVYAVSKGKLSIRPSDMEIDGSIIDDTSETSFSSSSSSNYTSTNLTDSSSVASSAALHSSSLPTRQIKALSTINHTFLSTSSSLNEINHYRGQSLDLGRKHVASSSSRNSDIDHIASQASSCGSISDNESWIYDQNSAKYVPQVTKLPSPNREENFNLELEKLRIELRHAQGMHAVAQSENIDASQKLNELNKRRVEESMKMKEIIAKEEMAKELANQEREKYEAAARETEYLKQCAGREAAERRESEMKATHAAKEKEKLEDALSGSTPQYRMFTWEEIVSATSSFSEDLMIGKGAYGMVYKCALHHTTVAVKVLHSNGNHKSKQFQQELEILSRICHPNLLLLLGACPDHGCLVYEYMENGNLEDKLFQKNSTTSIPWFERFRIAWEIASALSFLHSSKPQPIIHRDLKPANILLGRNLVSKIGDIGLSTILNSDDLSTMYKDTAPVGTLCYIDPEYQRSGLISPKSDVYAFGLVVLQLLTAKPAMALTDMVETAIDNGNLADILDPKAGSWPLQETLDIARLALSCAELRRKDRPDLKDHVLPMLERLKEVADGAAHSASIVNLKSRPPNHFICPILQDVMDDPCVAADGYTYDRNAIEKWLEENGKSPMTNMALPHKNLIPNYTLLSAILEWKS 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00130 797 CDD STKc_IRAK 452 710 - -
Car05g00130 797 Gene3D Phosphorylase Kinase; domain 1 424 518 - -
Car05g00130 797 PANTHER OS02G0152300 PROTEIN 12 796 - -
Car05g00130 797 Coils Coil 319 392 - -
Car05g00130 797 MobiDBLite consensus disorder prediction 402 422 - -
Car05g00130 797 CDD RING-Ubox_WDSUB1_like 734 774 - -
Car05g00130 797 Gene3D Transferase(Phosphotransferase) domain 1 519 725 - -
Car05g00130 797 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 35 12 796 - -
Car05g00130 797 SUPERFAMILY RING/U-box 728 796 - -
Car05g00130 797 ProSiteProfiles Protein kinase domain profile. 446 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00130 797 CDD STK_N 15 167 - -
Car05g00130 797 Gene3D HUPs 9 145 IPR014729 -
Car05g00130 797 Coils Coil 398 423 - -
Car05g00130 797 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 729 797 IPR013083 -
Car05g00130 797 Pfam Protein tyrosine and serine/threonine kinase 451 701 IPR001245 GO:0004672|GO:0006468
Car05g00130 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 564 576 IPR008271 GO:0004672|GO:0006468
Car05g00130 797 SMART serkin_6 446 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00130 797 Pfam U-box domain 731 796 IPR003613 GO:0004842|GO:0016567
Car05g00130 797 SUPERFAMILY Protein kinase-like (PK-like) 428 701 IPR011009 -
Car05g00130 797 ProSiteProfiles U-box domain profile. 729 797 IPR003613 GO:0004842|GO:0016567
Car05g00130 797 SMART Ubox_2 733 795 IPR003613 GO:0004842|GO:0016567
Car05g00130 797 ProSitePatterns Protein kinases ATP-binding region signature. 452 473 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00130 Car-Chr5 3018922 3028153 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00130 15 797 U-box Gene Family AT4G25160 52.068 0.0 832
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Car05g00130 PK_Tyr_Ser-Thr 1.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00130 - - gsj:114409387 1151.35