Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00129 ATGGATAGGATTCAAGAGACCGATCAAAGTAACAAAACACGGTATTCTTCGTCTTCAGCTGTAGCTTTAGCAATCAAGGGTAGCAAGAAAAGCAAATATGTTGTTCAATGGGCACTTAACAAGTTTGTTCCAGAGGGAATGATCATCTTCAAGCTGATACATGTTCATGCTGTGGGAGTTGTGCTCCCAGTTTCGCAAGTGCGTAACGATGTAGCAGCCGCATACAAAAAGGAAGTGGAGCATCAAATAAATCAAATGGTTCTACCTTTTAAGAAAATGTGTGAACAGAGAAAGGTTCATGTAGATGTTGTACTGATTGAATCGGATGATGTGGCATCTGCAGTGGCAGAGGAAGTAACTAAGGATGCTATAACCAAATTGGTCATCGGAGCTTCATCTGGTGGTATATTTAAAAGTAAACAAAAGAGTATGTCTGCAAAAATCTCAGTACGCACTCCAAGATTTTGTACAGTTTATGCTGTTTCAAAAGGGAATTTATCCATACGGCCATCAGACATGCAGATTGATGAAACCATTACCGATGACACCAGTGAAATCAGTTTTTCCTCCAGCAGCTCATCGAACTACACTTCTACGACTCAAACAGATTCTGGCTCAGTTGCGTCATATGCTGCTTTACATACCTCTTCCCTGGCAACACAGCGATTTCAAGCTCTTTCAAATATGAATCAGACCCTTCTAAGCACAACTCATGGTTTGAATGAAACTAATCATTCTAGAGGCCAGTCCATTGATCTTGGGAGAGAGAATCCTGCTACAAGTTCTGCTAGAAACTCAGATTTTGGTCGTGCTCTGAGTCGGGCATCTAGTTACAGAAGCATTGTTTCGGACCCTGAATCTTGGATTAATGATCAAAATTGTTTAAAGGGTTCGCCAGTAGCTACTAAACTGTCGTCACCAAATAGACAGGAAAATTTTACCCTTGAGCTGGAAAAGTTGAGAATTGAACTAAGACATTTCCAAGGAATGCATGCAGTAGCTCAAACGGAGAACATCGATGCATCACGAAAGCTAAATGAGCTAAGCAAGAGGAGATCAGGAGAATCCATGAAAATGAAGGAGATTATCGCTAAGGAAGAGGTGGCCAATGAATTAGCAACACAACAAAGAGAGAAATATGAAGCTGCTGCAAGAGAAGCTGAATATTTGAAAGAATGTGCTGAAAGAGAAGCTGCAGAAAGAAAAGAAACTGAGTTGAAAGCTATCCGTGCTGCCAAAGAGAAAGAAAAGCTAGAGGATGCTCTAAGCGGTTCCACACTCCAGTACCGGAAGTTTACGTGGGATGAAATAGTTTTAGCTACTTCGTCTTTCTCTGAAGAACTGAAAATTGGAATGGGTGCTTATGGAATGGTGTATAAGTGCACTTTGCATCACACAACGGTTGCTGTTAAAGTTCTCCACTCTGCCGGAATCAGCCAAAACAAGCAATTCCAGCAAGAGTTAGAGATATTGAGCAGAATTCGTCATCCAAACTTGCTTCTTCTTCTTGGTGCATGTTCTGATCATGGATGTCTTGTGTATGAATACATGGAAAATGGCAACTTGGAGGATAGACTGCTCCAGAAAAACAGTAATAACCCAATCCCATGGTTTGAGAGATTTCGAATAGCTTGGGAAGTTGCGTCAGCTCTTTCATTTCTTCACAGCTCAAAGCCACAACCTATTATCCATCGCGACTTGAAGCCTGCAAACATCTTGCTTGGCCGTAATCTTGTCAGCAAAATTGGTGATATTGGTCTTTCTACAATCCTCAATTCAGATGAATTATCTACCATGTATAAGGACACGGCGCCTGTTGGAACACTCAGCTATATTGATCCTGAGTATCAAAGGAGCGGCTTAATATCTACGAAATCCGATGTTTACGCTTTTGGATTAGTGATGTTACAGTTATTGACAGCAAAACCAGCAATAGCCCTTACTCATGTGGTTGAAATGGCAATCGAAGGTGGTAATTTAACCGATATATTGGATCCAAAGGCAGGATCATGGCCGTTTCAAGAGACATTAGACTTAGCTCGATTAGCTTTGAGTTGTGCAGAGCTTCGGCGTAAGGATCGACCTGATTTGAAAGATCATGTGCTTCCAATACTAGAGAGGTTGAAAGAAGTTTCTGATAGGGCTCATCATTCTGCTTCAATGATTACTATTAAACCCAAACCTCCAAACCATTTTATCTGCCCTATACTTCAGGATCTGATGGATGATCCTTGTGTTGCCGCAGATGGATATACATACAATCGCAATGCGATTGAAAAGTGGCTTGAAGAAAATGAAAAATCACCTATGACAAACATGGATTTGCCTCATAAACTTCTAATTCCTAATTACACACTTTTATCAGCAATTTTGGAGTGGAAGTCCAAAGAAATATGA 2397 0.4076 MDRIQETDQSNKTRYSSSSAVALAIKGSKKSKYVVQWALNKFVPEGMIIFKLIHVHAVGVVLPVSQVRNDVAAAYKKEVEHQINQMVLPFKKMCEQRKVHVDVVLIESDDVASAVAEEVTKDAITKLVIGASSGGIFKSKQKSMSAKISVRTPRFCTVYAVSKGNLSIRPSDMQIDETITDDTSEISFSSSSSSNYTSTTQTDSGSVASYAALHTSSLATQRFQALSNMNQTLLSTTHGLNETNHSRGQSIDLGRENPATSSARNSDFGRALSRASSYRSIVSDPESWINDQNCLKGSPVATKLSSPNRQENFTLELEKLRIELRHFQGMHAVAQTENIDASRKLNELSKRRSGESMKMKEIIAKEEVANELATQQREKYEAAAREAEYLKECAEREAAERKETELKAIRAAKEKEKLEDALSGSTLQYRKFTWDEIVLATSSFSEELKIGMGAYGMVYKCTLHHTTVAVKVLHSAGISQNKQFQQELEILSRIRHPNLLLLLGACSDHGCLVYEYMENGNLEDRLLQKNSNNPIPWFERFRIAWEVASALSFLHSSKPQPIIHRDLKPANILLGRNLVSKIGDIGLSTILNSDELSTMYKDTAPVGTLSYIDPEYQRSGLISTKSDVYAFGLVMLQLLTAKPAIALTHVVEMAIEGGNLTDILDPKAGSWPFQETLDLARLALSCAELRRKDRPDLKDHVLPILERLKEVSDRAHHSASMITIKPKPPNHFICPILQDLMDDPCVAADGYTYNRNAIEKWLEENEKSPMTNMDLPHKLLIPNYTLLSAILEWKSKEI 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00129 798 Coils Coil 363 421 - -
Car05g00129 798 PANTHER OS02G0152300 PROTEIN 17 794 - -
Car05g00129 798 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 35 17 794 - -
Car05g00129 798 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 21 153 - -
Car05g00129 798 SUPERFAMILY RING/U-box 727 796 - -
Car05g00129 798 MobiDBLite consensus disorder prediction 239 269 - -
Car05g00129 798 Gene3D Phosphorylase Kinase; domain 1 413 516 - -
Car05g00129 798 Gene3D Transferase(Phosphotransferase) domain 1 517 725 - -
Car05g00129 798 ProSitePatterns Serine/Threonine protein kinases active-site signature. 562 574 IPR008271 GO:0004672|GO:0006468
Car05g00129 798 ProSitePatterns Protein kinases ATP-binding region signature. 450 471 IPR017441 GO:0005524
Car05g00129 798 ProSiteProfiles Protein kinase domain profile. 444 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00129 798 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 727 798 IPR013083 -
Car05g00129 798 ProSiteProfiles U-box domain profile. 727 798 IPR003613 GO:0004842|GO:0016567
Car05g00129 798 SMART Ubox_2 731 793 IPR003613 GO:0004842|GO:0016567
Car05g00129 798 CDD RING-Ubox_WDSUB1_like 732 772 - -
Car05g00129 798 CDD STKc_IRAK 450 708 - -
Car05g00129 798 Pfam U-box domain 729 795 IPR003613 GO:0004842|GO:0016567
Car05g00129 798 Gene3D HUPs 5 163 IPR014729 -
Car05g00129 798 Pfam Protein tyrosine and serine/threonine kinase 448 699 IPR001245 GO:0004672|GO:0006468
Car05g00129 798 SUPERFAMILY Protein kinase-like (PK-like) 426 699 IPR011009 -
Car05g00129 798 CDD STK_N 21 164 - -
Car05g00129 798 SMART serkin_6 444 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00129 Car-Chr5 2991264 2999853 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00129 18 795 U-box Gene Family AT4G25160 51.578 0.0 800
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Car05g00129 PK_Tyr_Ser-Thr 4.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00129 - - gsj:114409387 1192.95