Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00114 atgacggtgcagattttcgaatcaccatatacctatagttttcctgtggcttctggttggattttcctcaggttatatttttatctggcttcttattCGGGTCTTAATATATCAGATGCCCGATTTGGCGTGACATCCCAATCCTACACCTTGCTTTGGAACTTCAGTGTTCTTGAGACCACTTTGGGTTCAAATGATCATTATGTTGTGAAGGAATATTCCATCCACATTGATGGAGGTACATTGAACTTAACTTTTACTCCATCTACCACTGCAATTAATGCATATGCATTTGTCAATGGGATTGAGGTCATGTCGATGCCTAATATTTATACTTCCACTGATGATGATGTCCATGTGATTGTTTGTATAAGAAGTGTCTTCAACGTTGACAACAGAACTGCACTTGAGAATGTTTATAGGTTAAATGTGGGTGGGAGTAATATTCCGGGTTCTCGTGATACTGGCATGTTTAGGTCTTGGAGTGCTGACGCGTCTTTCATACTAGGAACTGCATTCGGAGCTGTGAATGGTGGTATAGAAGTGAATATTGAGTATCCTCCAGGAACACCGTCTTATATTGCTCCGACTATTGTTTTCTCGTCGGCCAGATCGATGGGTGCAAACACGAATATCAACTTGAGTTACAACTTGACTTGGAcattctcaattgattctggAAGTGTCTTCACCATTGAAAACAGAACTACACTTGAGAATGTTTATAGGTTAAATGTGGGTGGGAGTAATATTCCGGGTTCTCGTGATACTGGCATGTTTAGGTCTTGGAGTGCTGACGCGTCTTTCATACTAGGAACTGCATTTGGAGCTGTGAATGGTGGTATAGAAGTGAATATTGAGTATCCTCCAGGAACACCGTCTTATATTGCTCCAACTATTGTTTTCTCGTCGGCCAGATCGATGGGTCCAAATGCCAATATCAACTTGAGTTACAACTTGACATGGAcattctcaattgattctggGAACTTCAGCGTTCTTGAGACCACTTTGGATTCAAATGATCATTATGTTGTGAAGGAATATTCCATCCACATTGATGGAGGTACATTGAACGTAACTTTTACTCCATCTACCACTGCAATTAATGCATATGCTTTCATCACATTTTGTCGCCGTAGGCATAGCACAAGTGAAGGACGACCTAGCTGGTTTCCACTTTCGCTTTTCAGTAATTCACCCTCTCCAGCTTCTGCCAATACCAACACAACAAGGAGTTACAAATCCTCACTTCCACAAAACCTTTGTCGTCATTTCTCGTTTGCGGAAATGAAGGCTGTTACAAACAACTTTGACGAGACTTTGATTCTCGGTGTGGGAGGATTTGGCAAGGTTTACAAAGGAGAAATTGACGGCGGATCGACTATAGTCGCAATTAAACCTGCGAATCCACTCTCCAAACAAGGTGAGCACGAATTCCAAACTGAAATTCAAATGCTCTCTGAACTTCGTCACCGCCACCTTGTTTCGGTGATTGGATACTGTGAAGAGAACACTGAAATGATCCTTGTCTATGATCACATGGCCTATGGAACACTCAGGGAGCATCTAGACAAGACACAGAAACATCCACTACCGTGGAAGCAAAGGCTTGAGATATGCATTGGAGCTGCTCAGGGTTTGCACTATCTTCACACCGGCGTTGAACGCACTATCATCCACCGTGACGTGAAGACAACAAACATTTTACTAGATGAGAAGTGGGTGGCCAAGGTTTCTGATTTCGGATTGTCGAAAACATATCCTTCATTGGATAATACACATGTAACTACTGAGGTAAAGGGTAGTTTCGGGTACTTGGATCCGGAATACTACAGGAGGCAGCAAATGACCGACAAATCCGATGTGTACTCATTTGGTGTGGTTATATTTGAGATACTCTGCGCTCGCCCGGCTTTGAACGTAAAACCAGCTGACGAGGAAATGAATCTAGGTAAATGGGCAGCTCATTGCTACAAAACAGGCATTCTTGACCAAATCAGTGATCCTTATCTGAAGGGCAAGATAGTTCCGGAATGCTTTAAGAAGTTCGCCGAGACCGCGATGAAGTGCGTAGCTGACCAAGGCATTGAAAGGCCATCGATGGGGGATGTCTTGTGGAACCTGGAACTTGCTTTGCGGCTTCAGAAAAGTTCAGAAGACACTGCAAATCCAGAAGATAATGCAAATCCAGAAGATAGTGGAAACAGTCTTGGCAGAAGACACTGCGAAGAGCCATTGTTTACAGATGTGAAAGGAAAGAAGAAGTTGGATTATGTGACTGATTCTGGAAACAGTGGTGATTCAACGAGTGTTGGAGGTAGAAGCTTGGCTAGAAAAGATTCTGCTCAGGGCTATTATGTTGTTCTTGATTATGAAGTTGAGCTATTAAAAGAAAACACACAAGCATCATTTCAAGCTGCAGGAGATGGATGGTTTACACTTTCAAAAGAGAGGTTTCAGACGGCAGAGATTTTATTCAAGCCACATATTGCTGGAATGCAAGCCATGGGTTTGCACCAGGCCATAGCTGTTTGTATGGAGTATTGTCATTCTGCAGAACTAACGGGCGACTGTGATTGGTACAAGATGGTAGTTTTATCGGGAGGAACTGCATGTTTGCCAAGTTTAGCAAACGGTGATTGGTACAAGACAGTAGTTTTATCGGGAGGAACTGCATGTTTGCCAGGTTTAGCAGATGTTAGGCTGAAAGTGTTTACTGCGTGCAAACGCATGCTTTTCCTACAACAGGGATTTTGGATCCCTATTTCTATCTGA 2778 0.4093 MTVQIFESPYTYSFPVASGWIFLRLYFYLASYSGLNISDARFGVTSQSYTLLWNFSVLETTLGSNDHYVVKEYSIHIDGGTLNLTFTPSTTAINAYAFVNGIEVMSMPNIYTSTDDDVHVIVCIRSVFNVDNRTALENVYRLNVGGSNIPGSRDTGMFRSWSADASFILGTAFGAVNGGIEVNIEYPPGTPSYIAPTIVFSSARSMGANTNINLSYNLTWTFSIDSGSVFTIENRTTLENVYRLNVGGSNIPGSRDTGMFRSWSADASFILGTAFGAVNGGIEVNIEYPPGTPSYIAPTIVFSSARSMGPNANINLSYNLTWTFSIDSGNFSVLETTLDSNDHYVVKEYSIHIDGGTLNVTFTPSTTAINAYAFITFCRRRHSTSEGRPSWFPLSLFSNSPSPASANTNTTRSYKSSLPQNLCRHFSFAEMKAVTNNFDETLILGVGGFGKVYKGEIDGGSTIVAIKPANPLSKQGEHEFQTEIQMLSELRHRHLVSVIGYCEENTEMILVYDHMAYGTLREHLDKTQKHPLPWKQRLEICIGAAQGLHYLHTGVERTIIHRDVKTTNILLDEKWVAKVSDFGLSKTYPSLDNTHVTTEVKGSFGYLDPEYYRRQQMTDKSDVYSFGVVIFEILCARPALNVKPADEEMNLGKWAAHCYKTGILDQISDPYLKGKIVPECFKKFAETAMKCVADQGIERPSMGDVLWNLELALRLQKSSEDTANPEDNANPEDSGNSLGRRHCEEPLFTDVKGKKKLDYVTDSGNSGDSTSVGGRSLARKDSAQGYYVVLDYEVELLKENTQASFQAAGDGWFTLSKERFQTAEILFKPHIAGMQAMGLHQAIAVCMEYCHSAELTGDCDWYKMVVLSGGTACLPSLANGDWYKTVVLSGGTACLPGLADVRLKVFTACKRMLFLQQGFWIPISI 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00114 925 ProSitePatterns Serine/Threonine protein kinases active-site signature. 559 571 IPR008271 GO:0004672|GO:0006468
Car05g00114 925 MobiDBLite consensus disorder prediction 718 741 - -
Car05g00114 925 Gene3D - 835 878 - -
Car05g00114 925 ProSitePatterns Protein kinases ATP-binding region signature. 444 467 IPR017441 GO:0005524
Car05g00114 925 SUPERFAMILY Actin-like ATPase domain 778 878 IPR043129 -
Car05g00114 925 ProSiteProfiles Protein kinase domain profile. 438 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00114 925 Gene3D - 237 334 - -
Car05g00114 925 Gene3D - 1 108 - -
Car05g00114 925 Gene3D - 135 233 - -
Car05g00114 925 PANTHER OS07G0166700 PROTEIN 230 334 IPR045272 GO:0004714|GO:0006468
Car05g00114 925 PANTHER OS07G0166700 PROTEIN 357 728 IPR045272 GO:0004714|GO:0006468
Car05g00114 925 PANTHER OS07G0166700 PROTEIN 1 228 IPR045272 GO:0004714|GO:0006468
Car05g00114 925 Gene3D Phosphorylase Kinase; domain 1 423 514 - -
Car05g00114 925 SUPERFAMILY Protein kinase-like (PK-like) 408 710 IPR011009 -
Car05g00114 925 Gene3D Transferase(Phosphotransferase) domain 1 515 734 - -
Car05g00114 925 Pfam Protein tyrosine and serine/threonine kinase 443 706 IPR001245 GO:0004672|GO:0006468
Car05g00114 925 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 357 728 - -
Car05g00114 925 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 1 228 - -
Car05g00114 925 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 230 334 - -
Car05g00114 925 MobiDBLite consensus disorder prediction 718 735 - -
Car05g00114 925 CDD STKc_IRAK 444 710 - -
Car05g00114 925 Gene3D Actin; Chain A, domain 4 775 833 - -
Car05g00114 925 SMART serkin_6 438 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00114 Car-Chr5 2755863 2762843 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00114 374 782 Receptor kinase-like Gene Family AT3G51550 67.916 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Car05g00114 PK_Tyr_Ser-Thr 1.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00114 - - cam:101501283 1194.49