Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00103 atgacaccagtTATGAGTGGTCTTTGTTTGGAAACAACCAGAGTTATTGTTTTGCGTGGTGTTCATGTTGTTATGGCAGTTAGGAATGTGAACAATGGAATGAATATCAGAGAAACTATACTTAAGGAAATTCTTGCGGCTAAAATTGATGTTATGGAATTAGATCTTAGCTCTAGGGAATATGTCAGGAAATTTGCAGTTGATTTTAACTCCTCTGGCCCACTCAACATTCTAACGCAGATAGGGGGTTACAGGAGCACAACCTGGTCCAATTTTGACATGGGCACAGAGAATTTTGATTTGTCAAATCAGGCTCCAGACATGGCTACACGTCTTCATTCCACCCGTGTCCTTGGAACCTTTGGTTACCATGCACCAGAGCAGATAGGGGGTTACAGGAGCACAACCTGGTCCAATTTTGACATGGGCACAGAGAATTTTGATTTGTCAAATCAGGCTCCAGACATGGCTACACGTCTTCATTCCACCCGTGTCCTTGGAACCTTTGGTTACCATGCACCAGAATATGCAACGACTGGACAACTGAATGCTAAGAGTGATGTATACAGTTTTGGTGTTGTCCTTCTGGAACTTTTGACCGGTATAATTTTATATATTTTTCAAATGATAGGATGGAGAAGGCTTCCGAGCAGGCGAGTGCCATTGTTGCTGCAGTTGAAGGCGCGAAACGCCATCGGGGTAACAATGCATCAGTTGTTTGTACTACTGTTGAATTCTGAAGTGAGTCCTCTATTCGCTTAA 762 0.4226 MTPVMSGLCLETTRVIVLRGVHVVMAVRNVNNGMNIRETILKEILAAKIDVMELDLSSREYVRKFAVDFNSSGPLNILTQIGGYRSTTWSNFDMGTENFDLSNQAPDMATRLHSTRVLGTFGYHAPEQIGGYRSTTWSNFDMGTENFDLSNQAPDMATRLHSTRVLGTFGYHAPEYATTGQLNAKSDVYSFGVVLLELLTGIILYIFQMIGWRRLPSRRVPLLLQLKARNAIGVTMHQLFVLLLNSEVSPLFA 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00103 253 Pfam Protein tyrosine and serine/threonine kinase 147 200 IPR001245 GO:0004672|GO:0006468
Car05g00103 253 Gene3D Transferase(Phosphotransferase) domain 1 144 226 - -
Car05g00103 253 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 98 128 - -
Car05g00103 253 SUPERFAMILY Protein kinase-like (PK-like) 147 206 IPR011009 -
Car05g00103 253 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 146 201 - -
Car05g00103 253 ProSiteProfiles Protein kinase domain profile. 1 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00103 253 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 84 IPR036291 -
Car05g00103 253 Gene3D - 2 122 - -
Car05g00103 253 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 146 201 - -
Car05g00103 253 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 98 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00103 Car-Chr5 2522016 2525088 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00103 139 201 Receptor kinase-like Gene Family AT4G02010 63.492 1.81e-17 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Car05g00103 PK_Tyr_Ser-Thr 3.7e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00103 K13436 - cam:105851109 156.762