Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00102 ATGAATCAGTGTAATCATCTGGCTGCAGTGTATTTTAATTTCCCGGAGCTATATAATTTCAAGAAGTTAGATGCCAGTAAACAGCCTGACGAGGAATTCTTGGCCCAGGTTTCAATGGTATCAAGGCTGAAGCAACAAATTTTTTTCCACTTGCTTGGATATTGCGTTGATGGAAACTCCTGTATTCTTGCTTATGAATTTACATCTAATGGGTCTCTTCATGTCATTTTACATGCCTTCATTGCTGCGCCACCTTTAAGCATTGTTGCAGCCTTCATTGCAGCGCAACCCTCCGTGCCTGTAAACCCTAAGTTGCAGCCTTCATTGCTGCGCCACCTTTAA 342 0.424 MNQCNHLAAVYFNFPELYNFKKLDASKQPDEEFLAQVSMVSRLKQQIFFHLLGYCVDGNSCILAYEFTSNGSLHVILHAFIAAPPLSIVAAFIAAQPSVPVNPKLQPSLLRHL 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00102 113 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 19 79 - -
Car05g00102 113 SUPERFAMILY Protein kinase-like (PK-like) 16 81 IPR011009 -
Car05g00102 113 Gene3D Transferase(Phosphotransferase) domain 1 16 89 - -
Car05g00102 113 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 19 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00102 Car-Chr5 2518616 2519472 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00102 25 74 Receptor kinase-like Gene Family AT3G58690 46.000 1.72e-09 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Car05g00102 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00102 K13436 - mnt:21397032 99.7525