Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00085 ATGGCGAAGTCAAAGAATCACACAGCTCACAACCAATCTTACAAGGCTCACAAGAACGGCATCAAAAAGCCAAAGAGGCACCGTCACACTTCCACCAAAGGGATGGATCCTAAGTTTCTCAGGAACCAGAGGTATGCAAGGAAGCACAACAACAAAAATGGGGAAATCGCCACCGAAGAAGAGTAA 186 0.4624 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNNKNGEIATEEE 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00085 61 MobiDBLite consensus disorder prediction 40 61 - -
Car05g00085 61 PANTHER 60S RIBOSOMAL PROTEIN L29 1 61 IPR002673 GO:0003735|GO:0005840|GO:0006412
Car05g00085 61 MobiDBLite consensus disorder prediction 1 32 - -
Car05g00085 61 Gene3D - 1 61 - -
Car05g00085 61 Pfam Ribosomal L29e protein family 3 42 IPR002673 GO:0003735|GO:0005840|GO:0006412
Car05g00085 61 PANTHER 60S RIBOSOMAL PROTEIN L29 1 61 - -
Car05g00085 61 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00085 Car-Chr5 2281458 2282210 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00085 1 61 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 85.246 9.25e-33 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00085 K02905 - gmx:100499874 128.257