Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00081 ATGGCTAAAGGTACTACTTTTACTACCCTTCTTTTCTTTCTCCTAATAATAACTTTCCTTTCAATTGCAATTTCAACACCAACAAATTTCATCAAATCATCATGTAGCACAACACAATACCCAACACTTTGTGTTGAATCACTTTCTACCTATGCATCAACAATTCAACAAGACCCTCATCAATTAGTCCAAACAGCTATATCAATAAGCCTCAACAAAACCCAATCCACTAAAGATTTTGTTACAAGGTGCAAAAATATCAAGGGTCTTAAAGCAAGAGAATATGCTGCCTTACATGATTGTAGTGAAGAAATTAGTGATAGTGTTGATAGGCTTATCCGTTCATTAAAAGAGCTTAAAATTTGCAAGATCAAAGGTGAGGATTTCAATTGGCATATAAGTAATGTTGAGACATGGGTTAGCTCAGCTTTGACTGATGAAACAACTTGTGGTGATGGGTTTGGTGGAAAAGCACTTAATGGGAGAATTAAAGCTTCCATTAGATCTAGAATGATTAATGTTGCTCAAGTTACAAGTAATGCTCTTGCACTTGTCAATCACTATGCTAGTAATCACTAG 579 0.3506 MAKGTTFTTLLFFLLIITFLSIAISTPTNFIKSSCSTTQYPTLCVESLSTYASTIQQDPHQLVQTAISISLNKTQSTKDFVTRCKNIKGLKAREYAALHDCSEEISDSVDRLIRSLKELKICKIKGEDFNWHISNVETWVSSALTDETTCGDGFGGKALNGRIKASIRSRMINVAQVTSNALALVNHYASNH 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00081 192 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 188 IPR035513 -
Car05g00081 192 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 11 191 - -
Car05g00081 192 SMART PMEI_2 26 184 IPR006501 GO:0004857
Car05g00081 192 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 188 IPR006501 GO:0004857
Car05g00081 192 Pfam Plant invertase/pectin methylesterase inhibitor 29 184 IPR006501 GO:0004857
Car05g00081 192 CDD PMEI-like_3 33 190 - -
Car05g00081 192 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 191 - -
Car05g00081 192 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 188 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00081 Car-Chr5 2250185 2251095 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00081 31 187 Carbohydrate Esterase AT3G14310 29.114 3.84e-20 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00081 - - gmx:100305900 283.878