Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00072 ATGGCTTCCTCCTCGAGCAGCGGATTAACATTCAAGCTACATCCACTCGTCATCGTAAACATCTCCGATCATTACACGAGGGTTAAGTCTCAGATGAATCCTACACATGCTCCTCACAACAACGCAACTAACAACGGCGGTGACGCCGTCGGTTCTTCTCTTCCACCGCGTGTTTACGGTTGTGTGATCGGTGTTCAGAAAGGTCGCACTGTTGAGATCTTCAATAGTTTCGAACTTCTCTATGATCCTTCTACTCATTCGCTTGATCGTCCTTTCCTTGAGAAGAAGCAAGAGCTCTATAAGAAGGTTTTTCCACACTTTTACATATTGGGATGGTATTCAACTGGGAGTGATGCAGAAGAACCTGACATGCATATTCACAAAGCTTTGATGGATATCAATGAAAGTCCGGTTTATGTTCTTCTAAACCCTTCAATCAATCATTCTCAGAAGGATCTCCCTGTCAGTATATTTGAAAGTGAACTGCATGTCATAGATGGGATTCCACAACTTATCTTTGTTCGCTCGAGCTATACTATTGAGACTGTTGAAGCAGAACGGATCTCAGTTGATCATGTTGCTCATTTAAAGCCATCTGATGGTGTGGCTGCTAACCTTACTGGTATACACAGCGCCATCAAAATGCTTCATAGCAGAATAAAGGTGCTGCATCACTATCTTCTTGCAATGGAAAAAGGTGATGTTCCTTGTGAGAATTCACTTTTAAGGCAAGTGTCAAGTCTCCTGAGAAGATTGCCTGCTATTGAATCTGGGAAATTTCAAGATGATTTCTTGATGGAATACAATGACACCTTATTGATTAGTTACCTTGCCATGCTGACCAACTGCTCAAGTGCAATGAATGATTTGGTGGACAAATTCAGTACTGCGTATGATAGGCATAACAGAAGAGGTGGACGAACTGCTTTCATGTGA 936 0.422 MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNPTHAPHNNATNNGGDAVGSSLPPRVYGCVIGVQKGRTVEIFNSFELLYDPSTHSLDRPFLEKKQELYKKVFPHFYILGWYSTGSDAEEPDMHIHKALMDINESPVYVLLNPSINHSQKDLPVSIFESELHVIDGIPQLIFVRSSYTIETVEAERISVDHVAHLKPSDGVAANLTGIHSAIKMLHSRIKVLHHYLLAMEKGDVPCENSLLRQVSSLLRRLPAIESGKFQDDFLMEYNDTLLISYLAMLTNCSSAMNDLVDKFSTAYDRHNRRGGRTAFM 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00072 311 Pfam Maintenance of mitochondrial structure and function 184 292 IPR024969 -
Car05g00072 311 ProSiteProfiles MPN domain profile. 11 164 IPR037518 -
Car05g00072 311 PANTHER COP9 SIGNALOSOME COMPLEX SUBUNIT 6A 2 311 - -
Car05g00072 311 SMART pad1_6 10 163 IPR000555 GO:0005515|GO:0008233|GO:0008237
Car05g00072 311 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 7 136 IPR000555 GO:0005515|GO:0008233|GO:0008237
Car05g00072 311 CDD MPN_CSN6 9 304 IPR033859 GO:0000338|GO:0008180
Car05g00072 311 Gene3D Cytidine Deaminase, domain 2 1 198 - -
Car05g00072 311 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 2 311 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00072 2 262 Eukaryotic Initiation Factors Gene Family AT2G39990 23.308 8.80e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00072 K12179 - gmx:100797079 576.63