Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00071 ATGTCATGTAAATTTTCAGCACCAACAAGAAGAAGAGGTTttcttcttcttcttcttaatgtttttgtttcattcttaacaataaccttaacaacatcaacaacaaaaacaacCTTTGTTTCTTCTAATTCTTCAACTTTTGAAGCATCAAAATTGTTAAACAATTTCAAACACAAAACCATTATTTCTGATCCAAAAAACTTTCTTTCAAATTGGTCACTCTCTACTTCACCTTGTTTTTGGCATGGTGTTTCTTGTTCAACTTCCGGCGAAATCACCACCGTAAACCTCACCGGAGCTTCACTTTCCGGCAAAAATTTTAACCTTTCAACTTTCACTTCTTTACCTTCTTTACAACACCTTCTCTTACATGGGAATTCCTTCACTTCCTTTAACCTCTCTTTTTCAAAACCTTGTTCTCTTATCACTCTTGATCTTTCTTCAACCAATTTCTCAGGAATTTTTCCTTTTGAGAATTTTGTTACTTGTTATAATCTTAGGTATCTTAATTTGTCAAGGAATTTCATAACTTCAACAACAACAAAGAATCATGGTTTTTTAGGGTTTGGTAATGGTTCTTTTTCTTCTTTGATTCAACTTGATATGTCTAGGAACatgttatctgatgttggttttgttgttaatgttgTGACAAACTTTGAGGGTTTGGTTTTTGTTAATTTTAGTGACAATAGAATTTTAGGTCAAATCAGTGATTCACTTGTTGATGTTCCTAGTGTGAATTTGTCAACTTTGGATTTGTCTTATAATTTGTTGTTTGGGAAATTACCTAATAAAATTGTTGGTAATGGTGTTGTTGAGGTTTTGGATCTTTCAAGCAACAATTTTTCTGGCGGTTTTTCGGAGTTCGATTTTGGAGAGTGTAAAAGCCTTGTTTGGTTGAGTTTATCTCACAATGTGATATCTGATATTGAGTTTCCTCAAAGTTTGATGAATTGTAAGGTTTTGGAAAGTTTGGATCTTTCTCACAATGAATTTAGGATGAAGATTCCGGGCGTTGTTCTCGGCGAGTTGACGAATTTGAAGGAACTTTATTTAGGGAATAATTTGTTTTATGGAGAAATTTCTGAGGAGCTTGGTAAGGTTTGTGGTAATTTGGAAATTCTTGATCTCTCTATAAATAAACTTTCTGGTGAATTTCCTTTGGTTTTTGGAAAATGTTATAATTTGAAGAGTCTTAATCTAGCAAAAAATTTTCTATATGGTGATTTCCTTGAAAATGTTGTTACCAAATTTTCTAGTCTTAAATATCTCTATGTATCATTCAACAACATAACTGGTAATGTTCCTTTGTCACTTGTTGCAAATTGTTCTCAACTTAAGGTTCTTGACCTAAGTTCCAACGCTTTCACCGGCAAGGTTCCTTCGGTGTTGTGTCCTTCTAATTTGGAGAAGTTACTTTTGGCTGATAACTATCTTTCGGGGCATGTGCCGGTAGAGCTTGGTGAATGCAAGAGTTTGAAGACAATTGATTTTAGCTTCAACAATTTGAGTGGTTCGATACCTTTGGAAGTTTGGTCATTGCCTAATCTTTCCGACTTGATTATGTGGGCTAATAGGTTAACCGGCGAGATTCCCGAAGGAATTTGTGTCAATGGAGGGAACCTCGAGATGTTGATTCTTAATAACAATTTCATTTCTGGTTCCATACCGAAGTCCATTGCCAATTGCACTCGCATGATTTGGGTATCTTTGGCGAGTAACCGCATAACTGGTGAGATACCGGCCGGTATCGGGAATTTGAATGAACTTGCTATCCTACAATTAGGTAACAATTCGATCACTGGAAAGATTCCTCCGGAGATTGGAATGTGTAAGAGACTCATATGGATGGATTTGACTAGCAATAACCTTACTGGTACTATTCCGTCCGAGCTTGCCAATCAAGCCGGATTGGTCATTCCGGGCAGTGTTTCGGGTAAACAATTTGCATTTGTAAGAAATGAAGGTGGAACTAATTGTAGAGGAGCCGGAGGACTAGTTGAGTTTGAAGGTATAAGAGTGGAGAGGCTTGAAGGTTTTCCTATGGTTCATTCATGTCCATTAACAAGAATATATTCAGGCTTGACCGTTTATACTTTTGCATCCAATGGCAGCATGATCTACCTTGATCTTTCCTACAATTTCTTGTCGGGTAGTATTCCGGAAAATTTCGGCTCAATGTCCTATTTGCAGGTCTTGAATCTAGGCCACAACAGGCTCAATGGAAAAATTCCAGAAAGTTTTGGTGGTTTAAAAGCTATAGGTGTGCTTGATCTATCTCATAATAACCTTCAAGGATTCATTCCTGGATCATTAGCATCTCTATCGTTTCTCAGTGACTTTGATGTGTCGAATAATAACCTTACCGGTTCCATTCCTTCTGGAGGCCAGCTAACAACTTTTCCGGCATCTAGATACGAAAACAACTCGAATCTTTGTGGTGTTCCTTTACCACCATGTGGCGCTTCAAATCACTCGATAGCTTTTCATACGTGGGAGAAGAAGAAGCAACCAATTGCAGTTTTGGGTGTCACAGGCCTTCTTTTCTTCCTCTTGTTTGTTGTTGTGCTTGTATTAGGTGTATATCGGGTGCGGAAGATTAGAAAGAAGGAAGGATTGAGAGAAAAATATATAGAAAGTCTTCCAACTTCTGGAACCAGTAGTTGGAAGCTTTCTGGCTTTCCTGAGCCTCTAAGTATCAATGTTGCTACATTCGAGAAGCCTTTGCGCAAGTTGACATTCGCGCATCTTCTCGAGGCTACAAATGGTTTCAGTGCTGAAAGCTTGATAGGTTCAGGTGGTTTTGGCGAAGTCTATAAAGCTAAGATGAAAGACGGCAGTGTTGTTGCTATCAAGAAACTCATTCATGTCACAGGAACACCAGGTTATGTACCGCCTGAATACTATCAGAGTTTCCGATGCACGGCGAAAGGGGATGTTTATAGTTATGGTGTCATACTGCTAGAACTTCTGTCAGGTAAGAGGCCGATCGACTCAGCCGAGTTCGGCGATGATAACAACCTTGTTGGTTGGTCTAAGAAGCTTTATAGAGAGAGAAGAGTTAGTGAAATACTTGATCCTGATTTGATTATGCAAACATCTATTGAAGGTGAACTTTGTCAGTATTTGAGAATTGCTTTTGAATGTTTAGAGGAAAGACCATACCGGCGTCCAACGATGATACAACTGATGGCAATGTTTAAAGAGCTTCAAGTTGACACAGATAATGATAGTGTTGTTGATGGTTTCTCTATGAAAGACAGTGTTATTGATGAAACATGA 3285 0.3699 MSCKFSAPTRRRGFLLLLLNVFVSFLTITLTTSTTKTTFVSSNSSTFEASKLLNNFKHKTIISDPKNFLSNWSLSTSPCFWHGVSCSTSGEITTVNLTGASLSGKNFNLSTFTSLPSLQHLLLHGNSFTSFNLSFSKPCSLITLDLSSTNFSGIFPFENFVTCYNLRYLNLSRNFITSTTTKNHGFLGFGNGSFSSLIQLDMSRNMLSDVGFVVNVVTNFEGLVFVNFSDNRILGQISDSLVDVPSVNLSTLDLSYNLLFGKLPNKIVGNGVVEVLDLSSNNFSGGFSEFDFGECKSLVWLSLSHNVISDIEFPQSLMNCKVLESLDLSHNEFRMKIPGVVLGELTNLKELYLGNNLFYGEISEELGKVCGNLEILDLSINKLSGEFPLVFGKCYNLKSLNLAKNFLYGDFLENVVTKFSSLKYLYVSFNNITGNVPLSLVANCSQLKVLDLSSNAFTGKVPSVLCPSNLEKLLLADNYLSGHVPVELGECKSLKTIDFSFNNLSGSIPLEVWSLPNLSDLIMWANRLTGEIPEGICVNGGNLEMLILNNNFISGSIPKSIANCTRMIWVSLASNRITGEIPAGIGNLNELAILQLGNNSITGKIPPEIGMCKRLIWMDLTSNNLTGTIPSELANQAGLVIPGSVSGKQFAFVRNEGGTNCRGAGGLVEFEGIRVERLEGFPMVHSCPLTRIYSGLTVYTFASNGSMIYLDLSYNFLSGSIPENFGSMSYLQVLNLGHNRLNGKIPESFGGLKAIGVLDLSHNNLQGFIPGSLASLSFLSDFDVSNNNLTGSIPSGGQLTTFPASRYENNSNLCGVPLPPCGASNHSIAFHTWEKKKQPIAVLGVTGLLFFLLFVVVLVLGVYRVRKIRKKEGLREKYIESLPTSGTSSWKLSGFPEPLSINVATFEKPLRKLTFAHLLEATNGFSAESLIGSGGFGEVYKAKMKDGSVVAIKKLIHVTGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKRPIDSAEFGDDNNLVGWSKKLYRERRVSEILDPDLIMQTSIEGELCQYLRIAFECLEERPYRRPTMIQLMAMFKELQVDTDNDSVVDGFSMKDSVIDET 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00071 1094 Gene3D Ribonuclease Inhibitor 194 822 IPR032675 -
Car05g00071 1094 Gene3D Transferase(Phosphotransferase) domain 1 960 1088 - -
Car05g00071 1094 PANTHER SERINE/THREONINE-PROTEIN KINASE BRI1-LIKE 1 32 960 - -
Car05g00071 1094 Gene3D Ribonuclease Inhibitor 42 183 IPR032675 -
Car05g00071 1094 Pfam Protein kinase domain 957 1066 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00071 1094 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 32 960 - -
Car05g00071 1094 PANTHER SERINE/THREONINE-PROTEIN KINASE BRI1-LIKE 1 960 1079 - -
Car05g00071 1094 Pfam Leucine rich repeat 730 789 IPR001611 GO:0005515
Car05g00071 1094 Pfam Leucine Rich Repeat 165 197 IPR001611 GO:0005515
Car05g00071 1094 ProSiteProfiles Leucine-rich repeat profile. 297 318 IPR001611 GO:0005515
Car05g00071 1094 Gene3D - 645 702 - -
Car05g00071 1094 Gene3D Phosphorylase Kinase; domain 1 893 959 - -
Car05g00071 1094 Pfam Brassinosteroid receptor island domain 638 701 IPR045381 -
Car05g00071 1094 SUPERFAMILY RNI-like 376 795 - -
Car05g00071 1094 SUPERFAMILY Protein kinase-like (PK-like) 910 1072 IPR011009 -
Car05g00071 1094 ProSiteProfiles Protein kinase domain profile. 719 1071 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00071 1094 SUPERFAMILY RNI-like 96 466 - -
Car05g00071 1094 SMART LRR_typ_2 515 539 IPR003591 -
Car05g00071 1094 SMART LRR_typ_2 115 137 IPR003591 -
Car05g00071 1094 SMART LRR_typ_2 728 751 IPR003591 -
Car05g00071 1094 SMART LRR_typ_2 752 775 IPR003591 -
Car05g00071 1094 SMART LRR_typ_2 345 369 IPR003591 -
Car05g00071 1094 SMART LRR_typ_2 588 612 IPR003591 -
Car05g00071 1094 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 960 1079 - -
Car05g00071 1094 SMART serkin_6 925 1068 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00071 1094 Pfam Leucine rich repeat N-terminal domain 54 87 IPR013210 -
Car05g00071 1094 ProSitePatterns Protein kinases ATP-binding region signature. 931 954 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00071 Car-Chr5 2034468 2038148 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00071 10 960 Receptor kinase-like Gene Family AT1G55610 55.312 0.0 991
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Car05g00071 Pkinase 7.5e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00071 - - gmx:100779072 1202.19