Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00070 ATGGCTGGGATTGATGATAATGTTACTCTTAATGTTGATTGGGGTCTTCCATGTCCAAGTCCAAGGAGCCTTTTTTCTAGAATGCTAGATGGAGATAATGGAAGTGGTGGAACCGGGGCGCAAGATGGCGATTCTGGTGCCCAATTGAGCGACACAAGTTATCCGACCGAACACAAGTCGAGTTCGCGGGGTGGTCTTGTTGAAAGAATTGCTGCTAGGGCTGGATTTAATGCTCCTAGGTTGAATACAGAAAGCATTAGATCTACTGATCTTTCGCTCAATTCTGAGATTCAGTCGCCTTACTTGACTATACCGCCTGGTCTTAGTCCTACTACACTTTTAGATTCTCCGGTGTTCCTTGCAAATTCATTGGCACAACCATCTCCAACAACAGGAAAGTTTCCATTTGTTTCAAGTGTCAATGTTCCAGAAAAATCTAAAGATAATTGCTTTACTGATATTTATGCATCGTCCTTCGCTTTCAAGCCTACATCAGATTTGGGCCCCTCTTTTTATAATAGTGCTGGTAGAAAAATCAATTCAACGGCACTTCCTCATCAATCCCTTCACGGTATTGAAGCTTCAGTTCATTCAGAAAATTCTTTTCAACCTCAAAGAATTGATGCGGTTAAAGTTCAAGCCGAGAATAAAAGTAGCTTCCATCTTCAGGCCAACTTCTCCGACTCGCAGCCTCAAAAAGACAATGGAATCAAAATGTTCTCACCCGATCAAAGGGCTTTTGACACTGTTGGTGGTAGCGTCGAACATGCTACACCAATGGAAGAGCAAGCAGATGAAGAGGGAGAACAAAGAGTCAACGGAGACTCGTTGGTTGCCGGTGTTGGTGGTACTCCATCTGAAGACGGGTATAACTGGAGAAAATACGGTCAAAAGCAAGTGAAGGGTAGCGAATATCCGCGAAGTTACTACAAATGTACTCATACAAATTGTCCGGTGAAAAAGAAAGTAGAACGTTCTCATGAGGGCCACATAACGGAGATCATCTATAAGGGGGCACACAACCACCCGAAACCTGCTCCAAGTCGCCGGTCAGGCATGGGGTCGGCGAACCCTCATGCTGACATGCAAGTGGACAATCATGAACATGTTGAACCACAGAGTGGTGGCGAAGGTGACCTCGGCTGGGCTAATGCACAAAAGGGAAATATAGCTGGTGTTGGTAATTGGAAGCATGACAACCTTGAAGTGACATCATCTGCAACTGTTATCCCCGAGTATGGCAACCAATCCAACAATCTGCAAACTCAAAATGGTACTCACATTGATTCGGGAGATGCCGTGGACGGCTCATCTACTTTCTCTAACGAAGAAGAGGAAGATGATCAAGGCACTCATGGTAGTGTATCGTTAGGTTATGATGCGGAAGGAGATGAATCGGAGTCTAAAAGACGGAAATTGGAATCATATGCAACAGAGATGAGTGGAGCTACTAGAGCCATTCGCGAGCCTAGAGTTGTTGTGCAGACTACTAGCGAAGTAGATATCCTTGATGATGGTTATCGATGGCGGAAATATGGACAAAAAGTTGTCAAAGGAAATCCCAATCCAAGGAGTTACTACAAGTGCACCAATGCAGGGTGCACCGTAAGGAAGCATGTTGAAAGAGCATCACATGACCTTAAATCTGTGATTACAACATACGAGGGAAAGCACAATCACGATGTCCCCGCTGCTCGTTCCAGCAGTCATGTCAATGCAAATGCTTCAAACACGGCATCAGGTCAAGCTTCCGGTCTTCTTCAATCCCACATTCATAGACCCGAATCATCTCAAGTTCACAACGGCATGGGAAGGCCTTCACTCGCCTCATTTAACCTTCCTGGAAGACAGCAGCTAGGTCATCCACACGGCTTCTCCTTCGGCATGAATCAACCTATCAACCTATCGAACCTTGCAATGTCGGGAATGGGACCCTCAGCGCAATCAAAGCTTCCTGGAATGCTTATGAATCCGTTCATGGCGcaacaacaacaacatcaacaacagcagcagcagcagcaacatcaacatcaacaacGCGCCGGAAATGAAATGGGGTTTGTGTTGCCAAAAGGAGAACCGAATGTGGACGAACGCGGCCTTAACATGCATAATGGTTCATCATCAATGTATCAAGAAATTATGAATCACATGCCTCTTGGACCTCACATGTAA 2175 0.4423 MAGIDDNVTLNVDWGLPCPSPRSLFSRMLDGDNGSGGTGAQDGDSGAQLSDTSYPTEHKSSSRGGLVERIAARAGFNAPRLNTESIRSTDLSLNSEIQSPYLTIPPGLSPTTLLDSPVFLANSLAQPSPTTGKFPFVSSVNVPEKSKDNCFTDIYASSFAFKPTSDLGPSFYNSAGRKINSTALPHQSLHGIEASVHSENSFQPQRIDAVKVQAENKSSFHLQANFSDSQPQKDNGIKMFSPDQRAFDTVGGSVEHATPMEEQADEEGEQRVNGDSLVAGVGGTPSEDGYNWRKYGQKQVKGSEYPRSYYKCTHTNCPVKKKVERSHEGHITEIIYKGAHNHPKPAPSRRSGMGSANPHADMQVDNHEHVEPQSGGEGDLGWANAQKGNIAGVGNWKHDNLEVTSSATVIPEYGNQSNNLQTQNGTHIDSGDAVDGSSTFSNEEEEDDQGTHGSVSLGYDAEGDESESKRRKLESYATEMSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARSSSHVNANASNTASGQASGLLQSHIHRPESSQVHNGMGRPSLASFNLPGRQQLGHPHGFSFGMNQPINLSNLAMSGMGPSAQSKLPGMLMNPFMAQQQQHQQQQQQQQHQHQQRAGNEMGFVLPKGEPNVDERGLNMHNGSSSMYQEIMNHMPLGPHM 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00070 724 MobiDBLite consensus disorder prediction 560 626 - -
Car05g00070 724 MobiDBLite consensus disorder prediction 339 361 - -
Car05g00070 724 MobiDBLite consensus disorder prediction 413 438 - -
Car05g00070 724 MobiDBLite consensus disorder prediction 38 60 - -
Car05g00070 724 ProSiteProfiles WRKY domain profile. 498 563 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car05g00070 724 Gene3D WRKY domain 490 556 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car05g00070 724 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 73 607 - -
Car05g00070 724 MobiDBLite consensus disorder prediction 462 476 - -
Car05g00070 724 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 73 607 IPR044810 GO:0003700
Car05g00070 724 SUPERFAMILY WRKY DNA-binding domain 284 345 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car05g00070 724 MobiDBLite consensus disorder prediction 25 65 - -
Car05g00070 724 SMART WRKY_cls 286 344 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car05g00070 724 SMART WRKY_cls 503 562 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car05g00070 724 Pfam WRKY DNA -binding domain 504 560 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car05g00070 724 Pfam WRKY DNA -binding domain 287 343 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car05g00070 724 MobiDBLite consensus disorder prediction 413 477 - -
Car05g00070 724 ProSiteProfiles WRKY domain profile. 287 345 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car05g00070 724 MobiDBLite consensus disorder prediction 661 681 - -
Car05g00070 724 MobiDBLite consensus disorder prediction 565 605 - -
Car05g00070 724 Gene3D WRKY domain 280 346 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car05g00070 724 SUPERFAMILY WRKY DNA-binding domain 495 563 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00070 Car-Chr5 1978330 1983390 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00070 1 719 WRKY Transcription Factor Family AT5G56270 48.803 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car05g00070 WRKY 3.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00070 K18835 - gmx:100796545 1079.7