Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00062 ATGATTCGAAATTTGATTCGATCTCACTTTGTTCAAACTGCTCGTATTTCAATCCTACCTCATCAAATCAGGGACACAAAGAAGATGAAAGCTTTGAGCAAGAAAAACAAAAGAACTAAAGACGAAGAGGGTGAAACCAATGGAGTCGACAATGTAGTTGATCTGCCTTTGGCCAAAAGTAATGATGATCTACATTTGGTCAAAAGCAATAAAAGTGAAGATGACGAGCAAGGGAAGAAGATGAAGAAAAAGAAGAAGAAACTGAGTGAAAAAAGAAAACATAAGGAGTATAACGAGTTCCAAAGCAATGCATGTGAAAGTGATGACCAAGGAAAGATGAAAAAGAAGATAAGACTGTGTGATGAAAAGAAACTTAAGGAGGGTGATGACTTTAGAATCAATGATGGTGAAGATGGCGAGGAAGGCAAGAAGATAAAGAAAAAGAAACGAAGTGAAGAAAGCAGAGATAAGGTGTGTAATGAAATCAAAAGCAATGAATGTGAAGATGATGACCAAGGAAATAAGATGAAAAAGGAGAAACTAATTGAAGGAAGTAAACTTAATGAGTGCAATGACTTTAGAAGCAGTGAAGGTAATGATGGCGTGCAAGATaagaagaagaaaaaaaagaagaaactaagtgaagaaAGCATACATAAGGAGCATGACAAGTTTAAAAGCAATGAATGTGGAGATGATGGCCATGGAaagaagaagaagaagaagaagaagaagaaATCAATTGAAGGTGAAGATGATGGTGACCAAGGCAAGACAATGAAGAAGAAGGAACTGAATCACAATAGCAAAAGTATGGAGAGCAATGATTTTAATAGCAATGATAGTGATGCTAAGGCTAATGATCAAGGCAAGAAGAGGAAGAAAAAAAAGGTTGCTGAGTCAGTTACTGGTGAAACTCCTAAGAGTTCAAAGGGTAGACCATGGAAACCCAAACGAGTAACTTTTTCTGATCAAGTGGAGTTTTGTTGTGATGGCTTATTGCGTGGGAAAAGGTTTACACCAGAAGAAGATGAGAAAATCAAAGCAGCTGTTAATGACTATATAGATTCTCATTGTTTGGGAGAGAATGGTTTAGATATGATTCTCCATTGCGGATCACACCCCGAAATTAGAGGTTGTTGGAAGGAAATTGCAGAAGTATTACCTGAGAGGCCTGTCCGGAGTGTGTATGAACGTGGTCATGTTTTGTTGGAAAACGGTCAGAGGTGTAGGTGGACACCTGATGAGCTTGAATTTATACGGAAGTCCCAAGAGATACATGGATCTGATTGGAGGCCAATAGCTGACGCTTTGGGTAAAAGTCGATTTCAGGTTAAAGATGCATGGCGTAGATTAAAATTTACCAATTTAAAACAAGGACAATGGTCCCAAGACGAGTATCAAACTTTATTTGATTTAGTGAACCTGGATCTGCGCACAAGGGCAACAGAGCCTTATAGAAAATCAATGCATGGTATGTTGCGAGATAATATTAGTTGGGAGGCAATTGGTAACAAATTGAGCACCCGAAACAGTTCATTCTGTTGCAAAAAGTGGTATGAGCAGTTAACAACGCCTCTGGTTGCTAGTGGTGAGTGGTGTGATACTGATGACTACCGCTTAATAAGTACTTTATATACTTTGGATGCTTGCTGCAGGGATGATGTAGAGTGGGACGATCTGCTTGAGCATAGGTCTGGTGATGTATGCAGGCTACGATGGGATCAAATGGTCCAACATATTGGGGAGCACGCAGGGAAGTCATTTATTGAGCAGGTTGTAGTTGCTTCTAGCTACAACTCTCAAACTGTGCCCCCACCCAATTCCTATCCCATACTGCACAATTTTGCAATAACTGACAGGATTTATGTTCTTACTATTGTCTGCATTGCTTGGCTATATATACTCACCTCAATTGGACACAGCTCCTCCAAGATGGGTTCATTTTGCCCATGGGCTACTTCTGTTTTTATACCAGACATTTGA 1986 0.3847 MIRNLIRSHFVQTARISILPHQIRDTKKMKALSKKNKRTKDEEGETNGVDNVVDLPLAKSNDDLHLVKSNKSEDDEQGKKMKKKKKKLSEKRKHKEYNEFQSNACESDDQGKMKKKIRLCDEKKLKEGDDFRINDGEDGEEGKKIKKKKRSEESRDKVCNEIKSNECEDDDQGNKMKKEKLIEGSKLNECNDFRSSEGNDGVQDKKKKKKKKLSEESIHKEHDKFKSNECGDDGHGKKKKKKKKKKSIEGEDDGDQGKTMKKKELNHNSKSMESNDFNSNDSDAKANDQGKKRKKKKVAESVTGETPKSSKGRPWKPKRVTFSDQVEFCCDGLLRGKRFTPEEDEKIKAAVNDYIDSHCLGENGLDMILHCGSHPEIRGCWKEIAEVLPERPVRSVYERGHVLLENGQRCRWTPDELEFIRKSQEIHGSDWRPIADALGKSRFQVKDAWRRLKFTNLKQGQWSQDEYQTLFDLVNLDLRTRATEPYRKSMHGMLRDNISWEAIGNKLSTRNSSFCCKKWYEQLTTPLVASGEWCDTDDYRLISTLYTLDACCRDDVEWDDLLEHRSGDVCRLRWDQMVQHIGEHAGKSFIEQVVVASSYNSQTVPPPNSYPILHNFAITDRIYVLTIVCIAWLYILTSIGHSSSKMGSFCPWATSVFIPDI 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00062 661 MobiDBLite consensus disorder prediction 246 270 - -
Car05g00062 661 SMART sant 335 406 IPR001005 -
Car05g00062 661 SMART sant 408 455 IPR001005 -
Car05g00062 661 SMART sant 458 525 IPR001005 -
Car05g00062 661 Gene3D - 453 527 - -
Car05g00062 661 MobiDBLite consensus disorder prediction 92 113 - -
Car05g00062 661 MobiDBLite consensus disorder prediction 27 47 - -
Car05g00062 661 ProSiteProfiles Myb-like domain profile. 404 453 IPR001005 -
Car05g00062 661 Pfam Myb-like DNA-binding domain 412 470 - -
Car05g00062 661 Gene3D - 336 411 - -
Car05g00062 661 ProSiteProfiles Myb-like domain profile. 525 578 IPR001005 -
Car05g00062 661 MobiDBLite consensus disorder prediction 198 236 - -
Car05g00062 661 MobiDBLite consensus disorder prediction 128 317 - -
Car05g00062 661 CDD SANT 411 453 IPR001005 -
Car05g00062 661 MobiDBLite consensus disorder prediction 128 187 - -
Car05g00062 661 PANTHER GB|AAC33480.1 27 595 - -
Car05g00062 661 MobiDBLite consensus disorder prediction 285 302 - -
Car05g00062 661 MobiDBLite consensus disorder prediction 64 81 - -
Car05g00062 661 CDD SANT 338 399 IPR001005 -
Car05g00062 661 SUPERFAMILY Homeodomain-like 383 465 IPR009057 -
Car05g00062 661 ProSiteProfiles Myb-like domain profile. 454 523 IPR001005 -
Car05g00062 661 PANTHER GB|AAC33480.1 27 595 - -
Car05g00062 661 Gene3D - 413 452 - -
Car05g00062 661 MobiDBLite consensus disorder prediction 27 113 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Car05g00062 Myb_DNA-bind_6 5.5e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00062 - - cam:101514362 985.711