Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00048 ATGTATACCTCTACCAATACATGTGAGATAGTTGAATCAAGGGAAGAGATATTTCCCGAGTTTGAAATGGATGAAAAACCCGAAAGTAGTTGTTCCTACAAATTAGGTAAAAGGTATTCGATCGAGGATGATATTGATCGTCTTTTCCAGGCTATTGAGATTAGAAGTTCATCTAGAGGTAATAGTACATCAAGATCACAAAAGAGTGCTCTTAAAAGGCCAATTAAGGTTTGTTCGTCGCAGGCGTCGGGAATTGGTATCGCAGAGCCTGTTAGTTTGAAGCAGGCACTTAGAGGATTGTGCATCTCTCAGGCATCGGAAATGGCCGCTTTGAAGAGGCTTTCAAAGTCGTGTAGTTCATCAAGAGTATCAGAGGTTGTCATGGTAAAAAAGTTGGTTGAAATCTCCCTCGTGCCCGAGATATCAACACCGTCTGGTAAATTTCCCGATGTAGCAACATCAAGTACAAGTGCTAATCATTCTATTCCTTTGGTTGATGCTACCAAGTTTGTCTCTCGTGATCAGATTGTTCCTCTTCCGTCCGAGGTTGAAGCTGGTGAGCCAACGATACAACCAAGACTTGCAAATTTGTCACCGGTTACTTTGCGAACTGAGGAACTGCCAGAAGTCAGAAGGAATCCTGCTTCCTTGAGTAAAGCTTGTCTCGCTTCTTCAATGCCGGATAAGGACAAAGATGGCAATTTACATTATCCATCTTGTCCACCTAGCTCTAGTAATGATAGTGGAGTGGACAAATCCTCAAGCATTAGTACATGTTTGGCTAAGCCGATTTTCAATAACATGAACTTCCTTAAGAAAAAAGTAAAGAAAGATCGATGTTCTGCATTGAGCTGCGCTACTTCATGTAAGAAAAATGATTTCGGTTCTAATACTAGTTGTTTGGAGACTGGAAATTTTGATTTTAAGCATGAAGTGAAAGAAAATGATAAACTATCTCCATGCAGTTCAAATCATAGCATTGAAGTTAACTCAATTAATGTTGGTCAAGATTCAAGCAAACATGTTTTCGGTTTGAATTTCAATAAGAGAACTAAGTTTCTAGTTACAAAAGTTGACGAGAAATCGAGATCAAAGGAAAAGGGTGAGTTCTCTCAGAGCTCGAAAAGTAGCATTGGTGAGTATAGTAGTAGCACAAGCATCAGTGAAGAGAGCAATGTAAGCGGTTCGAGTCGCAGTGGCCAACGACCGCACATGTCAAAACACTTGAGATGGGAAGCTATTCACACTGTTCAGCAGAAGCATGGTAGTTTGAATTTGAGCCATTTCAGGCTGATAAGGAAGCTCGGTAGCGGTGACATTGGAACCGTTTATCTTGCAGAACTAATCGGTAGTAGTTGCTTTTTTGCATTGAAAGTTATGGACAATGAATTTTTGGCAAGTAGGAAGAAAATATTTAGGGTCCAAACTGAAAGAGAGATTCTTCAAAAGCTGGATCATCCGTTTCTTCCTACGCTTTATTCGCATATCGCTACGGATAAGCTCTCTTGCTTGGTGATGGAGTATTGTCCGGGCGGAGATCTGCATGTATTGCGACAGAGGCAAACGTATAAGAGCTTTACGGAGCAAGCGACTAGGTTCTATGTTGCTGAAGTTCTTCTAGCCCTTGAGTATTTGCACATGATGGGAGTTGTATATCGAGATCTAAAGCCAGAAAATATCCTCGTACGCGAAGACGGACATATTATGCTGACAGATTTTGACTTGTCACTCAGATGTTCTGTCAATCCAATCTTAGTCAAATCATCTTCACCTGACGCAGACTCGACAGCGAAGATGTCCAGTCCTTGTTCGGGTGCTAACTGCATACACCCTTTTTGTTTGCAACCGGATTGGCAAATTTCCTGCTTTACTCCTATTCTACTGTCTTCCGGAGCAAAATCTCGAAAGTCAAAGGCTGACATAGGTGCTCAAGTTGGTCCACTACCACAGCTTGTAGTCGAGCCTACCAATGCACGGTCGAACTCCTTCGTTGGAACATATGAATATCTTGCTCCGGAGATCATCAAAGGCGAGGGACATGGAAATGCAGTAGATTGGTGGACTTTCGGTGTATTTTTGTTCGAGCTTTTATATGGAAAAACTCCCTTCAAAGGTCTATCAAATGAAGATACATTAGCCAATATTGTGTCACAAAGCCTTAAGTTTCCAGATACTCCTATAGTAAGTTTTCATGCAAGAGATTTGATCAGAGGATTATTGATAAAGGATCCTGAAAATCGATTAGGTTCGGTAAAAGGTGCTGCGGAAATAAAACAGCATCCTTTCTTTGAAGGCCTTAATTGGGCTCTAATACGGTGCGCAGCACCGCCGGAGCTTCCGAAGTTTCGTGATTTCGGAACTAGTGTTTCATGTATGGCTGCACATATGGAGAATGCAAATGATTTAGAAGATTGTGAAGAGTTTGAGTTGTTTTAG 2436 0.4138 MYTSTNTCEIVESREEIFPEFEMDEKPESSCSYKLGKRYSIEDDIDRLFQAIEIRSSSRGNSTSRSQKSALKRPIKVCSSQASGIGIAEPVSLKQALRGLCISQASEMAALKRLSKSCSSSRVSEVVMVKKLVEISLVPEISTPSGKFPDVATSSTSANHSIPLVDATKFVSRDQIVPLPSEVEAGEPTIQPRLANLSPVTLRTEELPEVRRNPASLSKACLASSMPDKDKDGNLHYPSCPPSSSNDSGVDKSSSISTCLAKPIFNNMNFLKKKVKKDRCSALSCATSCKKNDFGSNTSCLETGNFDFKHEVKENDKLSPCSSNHSIEVNSINVGQDSSKHVFGLNFNKRTKFLVTKVDEKSRSKEKGEFSQSSKSSIGEYSSSTSISEESNVSGSSRSGQRPHMSKHLRWEAIHTVQQKHGSLNLSHFRLIRKLGSGDIGTVYLAELIGSSCFFALKVMDNEFLASRKKIFRVQTEREILQKLDHPFLPTLYSHIATDKLSCLVMEYCPGGDLHVLRQRQTYKSFTEQATRFYVAEVLLALEYLHMMGVVYRDLKPENILVREDGHIMLTDFDLSLRCSVNPILVKSSSPDADSTAKMSSPCSGANCIHPFCLQPDWQISCFTPILLSSGAKSRKSKADIGAQVGPLPQLVVEPTNARSNSFVGTYEYLAPEIIKGEGHGNAVDWWTFGVFLFELLYGKTPFKGLSNEDTLANIVSQSLKFPDTPIVSFHARDLIRGLLIKDPENRLGSVKGAAEIKQHPFFEGLNWALIRCAAPPELPKFRDFGTSVSCMAAHMENANDLEDCEEFELF 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00048 811 PANTHER FLIPPASE KINASE 1-RELATED 1 811 - -
Car05g00048 811 SUPERFAMILY Protein kinase-like (PK-like) 402 783 IPR011009 -
Car05g00048 811 ProSiteProfiles Protein kinase domain profile. 429 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00048 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 550 562 IPR008271 GO:0004672|GO:0006468
Car05g00048 811 Gene3D Transferase(Phosphotransferase) domain 1 509 577 - -
Car05g00048 811 MobiDBLite consensus disorder prediction 238 252 - -
Car05g00048 811 MobiDBLite consensus disorder prediction 226 252 - -
Car05g00048 811 Pfam Protein kinase domain 430 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00048 811 Pfam Protein kinase domain 660 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00048 811 MobiDBLite consensus disorder prediction 364 405 - -
Car05g00048 811 Gene3D Phosphorylase Kinase; domain 1 427 508 - -
Car05g00048 811 CDD STKc_phototropin_like 427 786 - -
Car05g00048 811 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL1 ISOFORM X1 1 811 - -
Car05g00048 811 MobiDBLite consensus disorder prediction 371 402 - -
Car05g00048 811 SMART serkin_6 429 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00048 811 Gene3D Transferase(Phosphotransferase) domain 1 657 781 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00048 Car-Chr5 1506349 1510670 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00048 310 811 AGC Kinase Gene Family AT3G52890 61.240 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Car05g00048 Pkinase 9.4e-38 CL0016