Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00043 ATGGCTCCCGCTCGTTCTCCTCGGGAATTGAACGTGTGCATGGCAAAGCTCGCCCAGAAGGCCGAGCGCTACGAAGACATGGCGAATTTCATGGGGAAGGTTGCCGCCGACGCCGATAACGAGGAACTCACGGTGGAGGAAAGGAACCTTCTCTCCGTGGCTTACTCGCACGTCATCGGAGCTCGACGTGCTTCTCGGCGTATCATTTCCTCTATTGAAACGGATGAGAGCCGCGGCAACGAGGACCACGACATCATCCGTGACTACCGATCTAAGCTCGAGTCCGAGGTCGTCAACATCTGTGACGATATCCTCAATCTCCTCGAGTCTCATCTGATTCCTTCCGCTTTCTCTGGCGATTCTAAGGTTTTATACCTCAAGATGAAGGCAGATTACCTCAGGTACCTCGCCGAGTTAAAAACCGGAGCCGAGCTTAAGCTGGCTGCAGATACCACTATCGCCACTTACAAATCTGCTCAGGACATTGCCAATGCCGAACTTCCTCCAACTCATCCACTTAGGCTTGGACTTGCATTGAACTTTGGTGTTTTTTACTATGAAATTCTTGAATCTCCTGTTCAGGCCTACTTTATTGGAAAAAAGGCTCTTGATGAAGCGAAGTCTAAATTGAAATTTGTTGGAAAGGAATCTCTTCAGAAGAGCACTTCGATCATGAAATGTCTTAGCGATAACCTCATCATCTGGACTTCCGAGTTGCAGACATTCATGACATACAAAATGGGTTCCTTCCCATATAGCACCAAGTTTATGGCCAGTGGGGTTGTTTATCTTGAAGACGGATCCTATACCAATTTAAGTTGGGATGGAAAAGGAGTTCCCAGTGTCATTTTGAAGAGCAATATTATCACAGGGAAATGCGATGTCGATGGTTTCCTATTTGGGAAGAGGAAGGATGTCTCAAGCCGTTTGACCAAGTGGGGAGATCCTATTCCTAGCAAGCTTATTGAGAAAATTGATGAATATATCCCATCTGATTTAGCTAAGCTGCTAAAAATAAATGAGAATTTGTCAAGTGGTGCTTGTAAACCTTGCTCCTGGATACACACTGACTTTATGGACGATAATATTTACATGGAATCATCATCGGCTTGCTCTACCTCCAGTGGGAATACAGAAGATGCTGCCCAGGTGGACAATGGTTTATTGAGTGATCATGGAGTGAAATCCTGGAGTCCTAGTCACATCCTTGATTTCAGTGATCTTTCTATGGGCGATCCTATTTTTGACTTGATACCAATTTATTTAGAGGTGTTTACAGGCGATTCATATCTCCTTAAGCAATTTTTAGAAAGTTACAAACTTCCTTTTGCTTGCAACATATTGAAGTGCAAGTCAACAGAGGGTGGTCAAAAGTTTGGTTGA 1383 0.4469 MAPARSPRELNVCMAKLAQKAERYEDMANFMGKVAADADNEELTVEERNLLSVAYSHVIGARRASRRIISSIETDESRGNEDHDIIRDYRSKLESEVVNICDDILNLLESHLIPSAFSGDSKVLYLKMKADYLRYLAELKTGAELKLAADTTIATYKSAQDIANAELPPTHPLRLGLALNFGVFYYEILESPVQAYFIGKKALDEAKSKLKFVGKESLQKSTSIMKCLSDNLIIWTSELQTFMTYKMGSFPYSTKFMASGVVYLEDGSYTNLSWDGKGVPSVILKSNIITGKCDVDGFLFGKRKDVSSRLTKWGDPIPSKLIEKIDEYIPSDLAKLLKINENLSSGACKPCSWIHTDFMDDNIYMESSSACSTSSGNTEDAAQVDNGLLSDHGVKSWSPSHILDFSDLSMGDPIFDLIPIYLEVFTGDSYLLKQFLESYKLPFACNILKCKSTEGGQKFG 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00043 460 SUPERFAMILY 14-3-3 protein 7 238 IPR036815 -
Car05g00043 460 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Car05g00043 460 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Car05g00043 460 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Car05g00043 460 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Car05g00043 460 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Car05g00043 460 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Car05g00043 460 SMART 1433_4 8 249 IPR023410 -
Car05g00043 460 Pfam 14-3-3 protein 14 236 IPR023410 -
Car05g00043 460 PANTHER 14-3-3-LIKE PROTEIN B 7 242 - -
Car05g00043 460 Gene3D - 2 245 IPR036815 -
Car05g00043 460 PANTHER 14-3-3 PROTEIN 7 242 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00043 Car-Chr5 1463397 1470493 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00043 6 240 14-3-3 family AT1G78300 67.089 3.38e-102 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00043 K06630 - gmx:100792014 318.161