Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00042 ATGACAGTAAATTCTGGAGGGGTTGTGTTCTTTGCCTTTTTCAATGTCCTTTTCAATGTCCTCGGCACTAATGATGCTTCTCCAAAGGAAGCAGCAGCTGTCTTAAAGATATCTTCATCAAGAATGGCAACACAGTCTGAACGCCTTGGATATGAATTCGCCAAGTGGTTGGGAGTCCAAACTCCACAGGCTAGAGTCATTCACAATACCAATTTAGAATGGCTCCAAATAAAGAATGCTGCAGAAAAAGCAAAGGACGTAGCAAGTTGTGAGAATGATATAATTGGTGTAACGACATGTTCTGAACTTTTGGAAGCACTCGAGCTTAGTCAATGTCTCTTGTTTATGAGTTATGTACATGGTTCACCTTTGCTTGAAAGCTCTAGCGCATTTGAATCACAAGATTCTGCCGAAAGAATATCAGAAGGCCTTGGCAGGGTAATGATGCTAGATCTTGTTATCAGAAATGAAGATAGGCTTCCGTGCCATCAACTTAGATGGCGTGGGAACCCTGCCAATTTGTTATTGGCTGAAAAGGCAATCTCTTCACATTTAGATACAATAGGAGAAGCCTTTGATCTTTTAATGAACCGACATAGACCTGGGATGACTAGAACTCTTCTAAAAGAAAGAAGGTCAACTTCAGTAAATAGCATATTGAGCTCTCATAATCATGGTATGGTATCACAAGGCTCTCATCTTTCACAGATGAGAGAATCATCCGATGACATGAGCCTTCAAAGTCAAACATCTAGAGAATCAATGTTTATTGGCTCCAACATTGTGGCTATTGACTCTGTTGTTCCTCGGCGACCCCCTGCTGGAAAACGGGCAGATGATCAGGTCAATTATCCTAAGTTGGTCGAGTTACTCCTAAATAGCTCTGATTTTTCCTCTAACTTGTTATATGATATAACTGGAGGGAAATTAGGAAGTCCTCCCTTAGAAGACATAAATATAACAGTTGATGTACAAGGAAGTGATGTAACATTAATAGTTCACGAGTTCCGCAGTGGTTTCCGTGCTGCTCTCAGGGATCTGCAAGGATTTCATACATTCCTGCATACACTTCACCAAAAACTTGATAACTTGTTACGATCGTTTAATAATACTATAAGCAAAATATCATTGGGGGAGTCTGAAAAAGAAGATTCGGTAATTTCTAACTCACCTTCACCTACCACTGGTAGTTGCAAAATATCATTGGGGGAGTCCGAAAAAGAAGATTCGGTAATTTCTAACTCACCTTCACCTACCACTGGTAGTTGTCCCTCTCCAACAAGTAAGGATAGGCTTTCCATTGATATCCATCGAGATTTTAGCGATACAGATTCACAGAGATCTGCTCCAAGGGCATCACCATCTTCAGGCAATAGAGATTTTTGTGACTCTGCTTCTCCTATGTCAAGAGAAGGTTGGCATGGTAAATCCTCTAAAGGAAGCGTGGAGCTACTTCACGGTTCCTGCTTTACAGCTAAGCTTCACGATTTTCATAAATTTGCCAAGGTTGATGCAGAATCTTATAAAGAATTGGAGCATTGGAATGAAATGCTTAAAAATGATATTATCAAGTTATGCCAGGAAAACAATTTCAATTCAGGATTTTTTGAGGGTAGTGACAGCAACACAGCTGTTGATGCATATGAATTGAAGGTCAGACTTGAGCATATCCTTGAGAGGATTGCATTGATATCTGAGGCTGCAAATACAGAGAGACCATCCGCCATTACAAATAGCCTGTACATCGGTGGAACACTATCCGCAAGATCTGTATACACAATGCAACACTTGGGAATCACTCATATTTTGTGTTTATGTACTAATGAAATTGGACAATCAGATTCTCAATTTCCTGATCTATTCATTTACAAAAATTTCTCTGTGTGCGACAATGAGGATGTTAACATCAGCAGCATATTTGACGAAGCTTGTGATTTTATAGAAGCTGTTGAGCGAACAGGCCAGAGTGTTTTAGTTCATTGCTTCGAAGGGAAAAGCAGAAGTGTCACTGTAGTCCTAGCTTACTTGATGCTCAGAAAGAAGTTCACATTAATAGAAGCATGGAATGCTGTGAAAAAAGTTCACCATCGAGCGCAGCCGAATGATGGCTTTGCTAAGATCTTACAGGAACTTGATCAAAAACTGTATGGAAAGGTTTCAATGGAGTGGCGGCGGTGGCGGAAACCAACGATGAAAGTTTGCCCAATATGTGGCAAGAATGCTGGATTGAGGAGCAATTCCCTTAAGCTACATCTACAGAGATCACATCAGGGAGTGTAG 2280 0.4053 MTVNSGGVVFFAFFNVLFNVLGTNDASPKEAAAVLKISSSRMATQSERLGYEFAKWLGVQTPQARVIHNTNLEWLQIKNAAEKAKDVASCENDIIGVTTCSELLEALELSQCLLFMSYVHGSPLLESSSAFESQDSAERISEGLGRVMMLDLVIRNEDRLPCHQLRWRGNPANLLLAEKAISSHLDTIGEAFDLLMNRHRPGMTRTLLKERRSTSVNSILSSHNHGMVSQGSHLSQMRESSDDMSLQSQTSRESMFIGSNIVAIDSVVPRRPPAGKRADDQVNYPKLVELLLNSSDFSSNLLYDITGGKLGSPPLEDINITVDVQGSDVTLIVHEFRSGFRAALRDLQGFHTFLHTLHQKLDNLLRSFNNTISKISLGESEKEDSVISNSPSPTTGSCKISLGESEKEDSVISNSPSPTTGSCPSPTSKDRLSIDIHRDFSDTDSQRSAPRASPSSGNRDFCDSASPMSREGWHGKSSKGSVELLHGSCFTAKLHDFHKFAKVDAESYKELEHWNEMLKNDIIKLCQENNFNSGFFEGSDSNTAVDAYELKVRLEHILERIALISEAANTERPSAITNSLYIGGTLSARSVYTMQHLGITHILCLCTNEIGQSDSQFPDLFIYKNFSVCDNEDVNISSIFDEACDFIEAVERTGQSVLVHCFEGKSRSVTVVLAYLMLRKKFTLIEAWNAVKKVHHRAQPNDGFAKILQELDQKLYGKVSMEWRRWRKPTMKVCPICGKNAGLRSNSLKLHLQRSHQGV 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00042 759 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 637 693 IPR000387 GO:0016311|GO:0016791
Car05g00042 759 MobiDBLite consensus disorder prediction 379 477 - -
Car05g00042 759 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 398 757 - -
Car05g00042 759 Pfam Dual specificity phosphatase, catalytic domain 580 713 IPR000340 GO:0008138|GO:0016311
Car05g00042 759 Pfam Actin-fragmin kinase, catalytic 5 241 IPR015275 -
Car05g00042 759 MobiDBLite consensus disorder prediction 431 445 - -
Car05g00042 759 Gene3D Protein tyrosine phosphatase superfamily 555 725 IPR029021 -
Car05g00042 759 MobiDBLite consensus disorder prediction 222 243 - -
Car05g00042 759 SUPERFAMILY Protein kinase-like (PK-like) 2 281 IPR011009 -
Car05g00042 759 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 2 397 - -
Car05g00042 759 Gene3D - 123 379 IPR036940 GO:0016301
Car05g00042 759 MobiDBLite consensus disorder prediction 379 429 - -
Car05g00042 759 SMART dsp_5 572 714 IPR020422 GO:0006470|GO:0008138
Car05g00042 759 MobiDBLite consensus disorder prediction 446 463 - -
Car05g00042 759 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 2 397 IPR035010 GO:0004721|GO:0009737|GO:0043622
Car05g00042 759 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 572 717 IPR029021 -
Car05g00042 759 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 398 757 IPR035010 GO:0004721|GO:0009737|GO:0043622
Car05g00042 759 ProSiteProfiles Dual specificity protein phosphatase domain profile. 572 717 IPR020422 GO:0006470|GO:0008138
Car05g00042 759 CDD DSP 573 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00042 Car-Chr5 1434399 1440022 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00042 1 757 Protein tyrosine phosphatase (PTP) family AT5G23720 60.995 0.0 867
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00042 K14165 - gmx:102661225 1031.55