Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00031 ATGGTGTCTATGATGGATCAATACGAGATCATGGAGCAGATCGGTCGCGGTGCGTTCGGTGCTGCGATTCTCGTTAACCATAAATCGGAGAAGAAGAAATACGTGTTGAAGAAAATTAGGCTTGCAAGGCAAACTGAGCGGTGCAGAAGATTTGCTCATCAAGAGATGGCTCTTATTGCTCGGATTAAACACCCTTACATTGTAGAATTCAAGGAGGCTTGGGTTGAGAAGGGTTGTTATGTCTGCATTGTTACTGGATACTATGAAGGTGGAGACGTGGCAGCATTGATGAAAAAAATCAAATGA 306 0.4346 MVSMMDQYEIMEQIGRGAFGAAILVNHKSEKKKYVLKKIRLARQTERCRRFAHQEMALIARIKHPYIVEFKEAWVEKGCYVCIVTGYYEGGDVAALMKKIK 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00031 101 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Car05g00031 101 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK5 3 99 - -
Car05g00031 101 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 3 99 - -
Car05g00031 101 ProSiteProfiles Protein kinase domain profile. 8 101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00031 101 Pfam Protein kinase domain 8 98 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00031 101 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Car05g00031 101 SUPERFAMILY Protein kinase-like (PK-like) 5 99 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00031 Car-Chr5 982369 982674 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00031 9 100 MAP Kinase Kinase Gene Family AT4G26070 31.522 1.57e-09 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Car05g00031 Pkinase 1e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00031 K08857 - vvi:100258125 187.578