Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00023 ATGGCTGCAACTTTGGTTGGAGGGGCTTTTCTCTCTGCAACTGTTCAAACCTTAGTTGAGAAACTTGCGTCAACTGAATTTCGTGATTACATCAAAAACACCAAACTGAATGAGTCGTTGTTGGCAGAGTTGAAAACAACACTGCTCGCTCTTCAAGCTGTGCTGGATGATGCAGAGATGAAGCAGATCACAAACACTGCTGTCGAAACATGGTTAGATGAATTGAAAGATGCAATCTTTGATGCTGAGGATTTGCTCAACCAAATCAATTACGACGCCCTGCGGTGCAAGATGGAGGTAAAACAAGGTGAAAACATTACTGGTCAGGTATGGAACCTCATTTCATCTCCATTTAAAAACATCTACGCAGAGATCAATTTACAAATGAAGAATATGTGTCAAAGGCTGCAACTTTTTGCTCAGCAGAGAAACATCCTTGGCTTGCAAACTGTGAGCGGGAGAGTTTCTCGTAGAACGCCTTCGAGTTCAATGGTAAACGAATCTTTTATGGTTGGTAGGAAGGATGATAAAGAGGAACTAATTAGTATGTTGTTATCACACAGTGACACAAATAGTAATAATATTGGTGTTGTGGCAATTTGGGGCATGGGGGGTGTTGGCAAAACAACCCTTGCCCAACTTCTTTACAATGATAAAAAAGTACAAGAACATTTTGATCTGAAAGTCTGGGTTTGTGTGTCGGAGGATTTCAATATTTTGAGAGTAACTAAATCGTTGCTTGAATCTATCACTTCACGAGGCAGTGAAAGCACTAATCTTGATTTTCTTCGACGTGAATTAAATAAAAACTTGAGTGATAAAAGATTTTTGTTAGTGCTGGACGACCTTTGGAATGACAATTATAATGATTGGGATGAACTAGTAACTCCTTTGGTTAACGGAAAAATTGGAAGTAGGGTCATCATCACAACACGCCACCAAAAAGTTGCTGAGGTTGCACACACATTCCCCATTCATAAAGTAGAGACGTTATCAGATGATGATTGTTGGTCTTTACTCTCAAAGCATGCATTCAGAAGTGAAAACTGTCAAAGCAACGAATCCCCAAATCTAGAAGCAATTGGCAAGAAGATTGCAAAAAAGTGTGGTGGATTGCCCATAGCTGCTAAAACACTCGGAGGACTTTTGCGTTCAAAAGTAGATGCAAAAGAGTGGGCTGAAATTCTAAACAGTGACATATGGAAATTAACAAAGGATAATATTTTGCCTGCTTTGCGTTTGAGTTATCAAGATCTCCCCTCTCATTTGAAAAGATGTTTTGCCTATTGCTCAATTTTTCCGAAGGATTTTCCATTTGATAGGAAGCAATTGGTTTTGTTGTGGATGGCAGAAGGCTTCCTAGACCATTCTCTAGAAAATAAAACACCTGAAGAAGTAGGCGACGACTACGTCAATGAATTGTTGTCCAGATCCTTAATTCAAGTACAACAATCAAACGGTAATTTTGGAAGACAAAAGCTTGTTATGCACGACCTTGTTAATGATTTAGCCTCAATGGTATCTGGGAAAAGTTATTTCAGGCTTGAATGTAGTAGTAAAATCTCTAAAAATGTTCGTCATTTGTCATATAATCAAGAATTTTACGACATTTTCAAAAAGTTTGAAGTTCTGGACAATTTCAAATGCTTGCGAAGCTTCCTACCCGTTAACCTTTTCGACTTCAGTTATGATTATTACTTATCTAGAAAGGTTGTTGAAGATTTGCTACCCAAACTCATAAGGTTACGTGTGCTGTCCTTAAGTAGTTATCGAAACATAACCACACTACCAGAATCAATTGGTAGAATGGTGTTGTTGCAATATCTAGATCTCTCATTCACTGGAATCAAAAGCTTGCCTGATGCAATTTGTAAACTTTACAATTTGCAAACCTTGAATTTAATGGGGTGCATGGATCTTACTGAGTTGCCACTATGTTTCGGACAGTTGATTAACTTACGTCACTTGGATATTAGTGAGACAAACATAAATGAGATGCCAAAACAAATTGTTGCACTAGAAAACCTTCAGACATTAACTGTTTTTGTAGTTGGCAAGCAAGAAATTGGGTTAAGTGTCAAAGATCTTGGGAAGTTTCCTAACCTACAAGGAGACCTTTGTATCAAGAACCTGCATAATGTCATCGACGCCGTTGACGCTAGTGATGCCAACATGAGAAGCAAAAAACATATTGAGGAGTTAGAGTTACAATGGAGCAAGCAAACTGAAGACTCGCGAATGGAGAAAGATGTGCTTGATATGTTGAAACCGTCACTAAATCTCAAAAAACTGAGCATTGACCTATATGGAGGCACAAGCTTTCCGAGTTGGTTGGGAGATTCTTCTTTTTCAAACATGGTGTCCTTGTGCATCTCTAATTGTGAATATTGCATAACAGTTCCACCACTAGGACAACTACCTTCTCTCAAGGACTTGACTATTAGTGGTATGAAAATGGAAATAATTGGGATAGAATTCTATGGGATGACATTAGAACCTTCCATTTCTTCATTCCAACCATTTCGATCTCTCGAGAAACTGAATTTTGATTGCATGCCGAATTGGAAGGAATGGATACACTATGAAAGTGGTGAAGTTGCTTTCCCTCGTCTTAGAACTTTGTCGTTAAGCAAATGTCCAAAACTAATGGGACATATGCCTAACCATCTTTCTTCAATAGATGAAGTTAGCATAACTTGTTGTGATAGTCTCTTGACAACACCGCATACTACGTTACATTGGGTCTCCTCATTAAAAAAAATAAGTATTCAAAAAGATCAAAATTCTCTAATGGTTTCTAAAAGGACCCAATTGTTGTTACCTGTGAGTGAAAGGACCCAATGGTTGTTACCTGAGAATGATTCTCCATGTCTACTACAGAGTTTATTTATTCGTTACTATGATACACTATTTTCAATACCTAAAATTATTATGAGCAGCAATTGTCTTCAATCCTTGAAACTCTATGATATTCCGTCTCTTGGTGCTTTTCCAACAGATGGTCTACCCACTTCATTGCAATCACTTACTATTTATAATTGTGAGAATTTAGCATTCTTGCCTCTTGAAACATGGGGCAATTACACATCGCTTGTGAATTTGCATTTAGCGAAAAGTTGTAATTCACTTACCTCATTCGCATTGGATGGTTTCCCAACACTCCAAAACCTTCATATTGATTCCTGTACAAATTTGGAATCCATTTTTATTTCAAAAACATCTTTGCTTCTTCCGTCATCTTTGACTCCACGGATGGAAACTCTAACCTCTCTAGAATATTTGTATCTCAAAAATCTTCCAAAACTATCATTTTGTGAAGGAGCTTGCCTACCTCCCAATTTAGGATGTATTTATATTGGATCAGTGAGAATAACAACACCTATATTTGAATGGGGTCTCCAACGCCTTACTGCTCTTTCAACATTGAGTATTGGAAGTGATGATGATATTGTTAACACCTTGTTGAAGGAGAAATTGTTGCCTATTTCCCTTAGGGATCTATTTATCCATCATCTCTCTGAAATTAAATCCTTTGAAGGAAATGGACTTCGACACCTTTCCTCTTTAGAAGCACTTTGCTTTAATGATTGTCCAAGGCTTGAGTATTTGTTAGAAGACACATTGCCTTCCTCTCTTAAGATACTGAGAATTGTGAAATGCCCTCTATTAGAAGCAAGTGATAATATGAGTCAGGTGTGTCATCGGTAA 3708 0.3776 MAATLVGGAFLSATVQTLVEKLASTEFRDYIKNTKLNESLLAELKTTLLALQAVLDDAEMKQITNTAVETWLDELKDAIFDAEDLLNQINYDALRCKMEVKQGENITGQVWNLISSPFKNIYAEINLQMKNMCQRLQLFAQQRNILGLQTVSGRVSRRTPSSSMVNESFMVGRKDDKEELISMLLSHSDTNSNNIGVVAIWGMGGVGKTTLAQLLYNDKKVQEHFDLKVWVCVSEDFNILRVTKSLLESITSRGSESTNLDFLRRELNKNLSDKRFLLVLDDLWNDNYNDWDELVTPLVNGKIGSRVIITTRHQKVAEVAHTFPIHKVETLSDDDCWSLLSKHAFRSENCQSNESPNLEAIGKKIAKKCGGLPIAAKTLGGLLRSKVDAKEWAEILNSDIWKLTKDNILPALRLSYQDLPSHLKRCFAYCSIFPKDFPFDRKQLVLLWMAEGFLDHSLENKTPEEVGDDYVNELLSRSLIQVQQSNGNFGRQKLVMHDLVNDLASMVSGKSYFRLECSSKISKNVRHLSYNQEFYDIFKKFEVLDNFKCLRSFLPVNLFDFSYDYYLSRKVVEDLLPKLIRLRVLSLSSYRNITTLPESIGRMVLLQYLDLSFTGIKSLPDAICKLYNLQTLNLMGCMDLTELPLCFGQLINLRHLDISETNINEMPKQIVALENLQTLTVFVVGKQEIGLSVKDLGKFPNLQGDLCIKNLHNVIDAVDASDANMRSKKHIEELELQWSKQTEDSRMEKDVLDMLKPSLNLKKLSIDLYGGTSFPSWLGDSSFSNMVSLCISNCEYCITVPPLGQLPSLKDLTISGMKMEIIGIEFYGMTLEPSISSFQPFRSLEKLNFDCMPNWKEWIHYESGEVAFPRLRTLSLSKCPKLMGHMPNHLSSIDEVSITCCDSLLTTPHTTLHWVSSLKKISIQKDQNSLMVSKRTQLLLPVSERTQWLLPENDSPCLLQSLFIRYYDTLFSIPKIIMSSNCLQSLKLYDIPSLGAFPTDGLPTSLQSLTIYNCENLAFLPLETWGNYTSLVNLHLAKSCNSLTSFALDGFPTLQNLHIDSCTNLESIFISKTSLLLPSSLTPRMETLTSLEYLYLKNLPKLSFCEGACLPPNLGCIYIGSVRITTPIFEWGLQRLTALSTLSIGSDDDIVNTLLKEKLLPISLRDLFIHHLSEIKSFEGNGLRHLSSLEALCFNDCPRLEYLLEDTLPSSLKILRIVKCPLLEASDNMSQVCHR 1235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00023 1235 Gene3D - 154 323 IPR027417 -
Car05g00023 1235 Gene3D Ribonuclease Inhibitor 541 938 IPR032675 -
Car05g00023 1235 CDD AAA 171 283 - -
Car05g00023 1235 Coils Coil 41 61 - -
Car05g00023 1235 Gene3D - 421 505 IPR036388 -
Car05g00023 1235 Pfam Rx N-terminal domain 10 102 IPR041118 -
Car05g00023 1235 Gene3D Ribonuclease Inhibitor 959 1234 IPR032675 -
Car05g00023 1235 Gene3D - 13 137 - -
Car05g00023 1235 SUPERFAMILY L domain-like 495 921 - -
Car05g00023 1235 PRINTS Disease resistance protein signature 866 882 - -
Car05g00023 1235 PRINTS Disease resistance protein signature 369 383 - -
Car05g00023 1235 PRINTS Disease resistance protein signature 270 284 - -
Car05g00023 1235 PRINTS Disease resistance protein signature 197 212 - -
Car05g00023 1235 Gene3D - 330 420 IPR042197 -
Car05g00023 1235 Pfam NB-ARC domain 175 397 IPR002182 GO:0043531
Car05g00023 1235 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 430 IPR027417 -
Car05g00023 1235 PANTHER - 50 1029 - -
Car05g00023 1235 SUPERFAMILY L domain-like 950 1225 - -
Car05g00023 1235 PANTHER DISEASE RESISTANCE PROTEIN RP 50 1029 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00023 Car-Chr5 630867 635599 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00023 194 693 WRKY Transcription Factor Family AT5G45050 22.735 1.76e-12 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00023 - - mtr:MTR_3g032370 1458.74