Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03626 ATGGTGTCGGTTCAAGGAGTAAGTTGTTGTCCTACCTCTTCTTCCTCCTGTTTTGTTAGTGGGTCTCTTCAGTTTTGTCGCTCCTTTTCTGTAAGCTTTAGATTTGCCACAAAACCGAGACAACATCCTTCTTTCATATGCAATGCTTCATGGCAAGAGCTTGCGGGAGTTTTACTATTCTCAGCAATTCCTTTCACTGCCGTCAAAGCTATAGCTAATAGTCCGCTAGGGGAGTCGCTTCAGAGAAAAATGGAGGAACGAAAGATATTTGGTGTTCAAAACTCATCCAAATTCAAGGCTGAGGCTGACAAGGCCAGAAAAGAGAGCTTTTGGTATGGAGTAGATCGGCCTCGTTGGCTTGGTCCTATTTCATATGGATACCCATCATATCTTAATGGGGACCTTCCTGGGGATTATGGCTTTGACGTTGCTGCTCTTGCCAAGGATCCGGTGGCACTGCACAAATATTTCAACTTTGAGATATTGCATGCTCGGTGGGCTATGCTTGCATCTGTTGGTGCTCTGATTCCCGAGTTATTAGACCTCTTGGGAGCCTTTCACTTTGTAGAACCTGTTTGGTGGCGAGTTGGTTATTCCAAGCTCCAGGGAGAAACTCTAGATTACCTTGGTATCCCAGGTCTTCACTTAGCTGGAAGCCAGGGAGTGGTTGTGATTGCTATTTGCCAAGTACTCCTTATGGTTGGACCAGAATACGCTAGATATTGTGGGATTGAGGCATTGGAGCCTCTAGGCATATATCTGCCCGGTGATATAAACTATCCTGGAGGAGCATTGTTTGATCCCTTAAACCTGTCCAAAGATCCTGAAGCTTTTGAAGAGCTGAAGGTGAAAGAAATAAAAAATGGACGCTTGGCAATGATGGCTTGGTTAGGCTTCTTCATGCAAGCAGCCCTGACGGGTAAAGGTCCTGTGCAGAACCTTATGGATCACATCTCCGATCCTTTCCACAATAACCTGCTGGGGTCACTCAATTCAACAAAATTACTCTAG 1011 0.453 MVSVQGVSCCPTSSSSCFVSGSLQFCRSFSVSFRFATKPRQHPSFICNASWQELAGVLLFSAIPFTAVKAIANSPLGESLQRKMEERKIFGVQNSSKFKAEADKARKESFWYGVDRPRWLGPISYGYPSYLNGDLPGDYGFDVAALAKDPVALHKYFNFEILHARWAMLASVGALIPELLDLLGAFHFVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVVVIAICQVLLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSKDPEAFEELKVKEIKNGRLAMMAWLGFFMQAALTGKGPVQNLMDHISDPFHNNLLGSLNSTKLL 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03626 336 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 47 326 IPR001344 GO:0009765|GO:0016020
Car04g03626 336 Gene3D Chlorophyll a/b binding protein domain 118 329 - -
Car04g03626 336 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 7, CHLOROPLASTIC 47 326 - -
Car04g03626 336 SUPERFAMILY Chlorophyll a-b binding protein 110 330 - -
Car04g03626 336 Pfam Chlorophyll A-B binding protein 128 303 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03626 Car-Chr4 65716331 65720536 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03626 35 332 Chloroplast and Mitochondria Gene Families AT1G76570 74.917 5.70e-174 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03626 K14172 - gmx:100786260 540.421