Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03621 ATGCCCGTGACGTTGTTCAAAGAGAAAATTGCAAATGAAACAGGTGTTCCAGTTAGTCAGCAGCGTCTAATTTTTAGAGGAAAAGTCTTGAAGGACGAGCACGTTCTTTCTGATTATCATGTTGAGAATGGGCATACATTGCATTTAGTTGAAAGACAGCCAAATCAGTCACAGACTTCTGGTACGGGGTCTGGCGAGACAACTAGTACAAATGGTAACCGAGGAAATGATGTTGGATCAGGAGCTCCTCGTAACCGTGTTGGGCAAATTTCACACAGTGTGGTTCTTGGGACTTTTAATGTGGGGGAACAGGGTGAGGGCACTGCTCAAGACCTTACTCGGGTTATTGGGGCAGTTTTGAATTCTATTGCAAATGGGGGCCAGAGCACAATTAATGTTCCTAACTCGACACAATCTTCTTCAGTTCCACCGGGGAATGAAACTGAAAGAATGCAAGCTGGAAATCAAAGCTTAGCCGGAAATCAGGCACCATCTGGACAGGCTTTTCTTGGTCAGGCATTCCAACATTTGCCTCATGTTGTTCAGATTCCTATGGCTGCAGGAGCCATACCTATTCCTTCTCTCAATGCACCAATTCCTGATTCACTGAACACGCTGTCTGAGTTCATAAATTGCATGGAACAAGCACTTTCACAAAATGGTTATGTGCCAAATCTATCTTCAACTAACCCTGGAGATCGAGTGGAATTGCCTTCCAATACACAAGGGTTGCCGACACTTGAAGCATTAACCACTGTATTGCATCGTGCAGAACAGTTGCTTAGTGGTCAAGCTGTTGCTGCGCTATCTCATATTGCAGGACGAATGGAGCGAGAGGGAACTTCTGCAGATCTAGGTATAAGAGGTCAAATACAGTCAGAGTCAGTTCAGATAGGAATTGCTATGCAGCATTTGGGTGCACTTCTACTTGAACTAGGCCGAACTATGTTGACATTGCGAATGGGACGTTCTTCTGCAGAATCTGTTGTTAATGCTGGACCAGCAGTTTATATTTCTCCATCAGGGCCAAATCCTATAATGGTGCAGCCTTTTCCACTTCAGACAAGTTCCCTCTTCGGTGGCCCTCTTTCTTCTTCAACTCCTGCAACTTTAGGCACCGTTGGTGTTGGAAGTGTTCCTAGGAATGTAAACATTCACATACATGCTGGTGCCTCTCTTGCACCAATTGGCTCTAGGCCAAATAATGGAGAAGGGACAAGAAACGAACACCATAGTGAGCCTGGTTCTGGCGATTCAGGATCAACACGGGTTTTACCTGTTAGAAATGTCATATCAACAAGTTTCCCATCTAACCCTGTTGGCACTGGAACTGCTGGTAGCACACCAACTGGATTTGGTATTTCTACTTCACAGCTACCACCTGATTCAGCACCATTGTCATCTGTTTTAGCTGAAATCAATTCTCGTCTTAGAAACTCTGTTGGTAATATGCAAGGAGATAACACAGTTCTTTCAGGCCAAATGCAATTTTCTAGCAGGGACTTGAGATCTGAATCAAGACCTGCACAGGGAAATGAACAAAGAGATACTCTGGAGATGAGTGGCTGTGCGGCTTCCAGTGCATCCTCAGTTGGTTGCACTTCTGAAAGTGTTGTAGAGAAGCCCGAAACTGAGGCAATCAAAACCTGTAGTAATGACGAGAGAGATGTTTTGGTTGACAAATTTGTTTCAAGTTCTTCCGATCAAGCTTTACAAAGTTGTTCTAGTGGAGAAACAATGGTAAAATCAGAAAAAGTACCAGATACTCCATCTGCTAGTGAAAGACGAGATGTAACTGAACCTGCCAAAACTGCTCCTCTTGGACTGGGTGTGAGTGGATTGGAACGTAAGAGGCGAACTAGACTTCAACCTCCTGCAGGTAAAGGTGCTGATGGAGGGTCCTCCAGTTCTTCCATCAACCGAGGTCAGGAAACCAGGACAGATAGTCAACATATATTGCAAACACATGCGAGTCAAGGATCTGCTGTGATTAATGCTGATAGGCCGTCATCTCAGCAACCCATTCCCTCCGGTGGTAGTCAAATTGATGTGGGCGGTTTAATGTCTCAGGTTCTACATAGCTCTGCTTTGAATGGTTTGTTGGAAGGGTTTTCACAGCAAACGGGAGCTGACTCATCCGATGGCTTGAGGAATATGTTACAGCAGTTCACACAAAGCCCACAGATGATGAATACGGTTAATCAAATTGCACAGCAGGTTGGTAGTCAGGATATGGGGAATATGTTAACTGGAATGGAAAGAGGGCAGGGTGGTGGTGTCGACTTCTCTAGGATGCTTCAACAGATGATGCCCATTGTATCTCGAGCCCTTGGAGGGGTAAATCCTCCATCACTATTCTCTGCTGCAGAACCAGAAATCCAGGCACCCTACCGAGATGAAAATTTTGATAATCTAAGTTTACAGCCTGATCTTCAACCAGTGGCCGAGAGGATTGATCGCCTGAGTCCACCTACAGATGTCTTCCGTGCTGTAGCTGAAAACGCTGTCCAGCTGTCTGGGAGTGGAAGTGCTGCTGCTGATCTTTTGGATGAGTTATGTTGCAATGAGAGTCTTGCCAGTGAGTATATGGAGATGTTGCGATATGATGTAAGTGAGCTGCTTGAAGGAGGCTCTGAGAGGGACAAGTCCTAA 2652 0.4529 MPVTLFKEKIANETGVPVSQQRLIFRGKVLKDEHVLSDYHVENGHTLHLVERQPNQSQTSGTGSGETTSTNGNRGNDVGSGAPRNRVGQISHSVVLGTFNVGEQGEGTAQDLTRVIGAVLNSIANGGQSTINVPNSTQSSSVPPGNETERMQAGNQSLAGNQAPSGQAFLGQAFQHLPHVVQIPMAAGAIPIPSLNAPIPDSLNTLSEFINCMEQALSQNGYVPNLSSTNPGDRVELPSNTQGLPTLEALTTVLHRAEQLLSGQAVAALSHIAGRMEREGTSADLGIRGQIQSESVQIGIAMQHLGALLLELGRTMLTLRMGRSSAESVVNAGPAVYISPSGPNPIMVQPFPLQTSSLFGGPLSSSTPATLGTVGVGSVPRNVNIHIHAGASLAPIGSRPNNGEGTRNEHHSEPGSGDSGSTRVLPVRNVISTSFPSNPVGTGTAGSTPTGFGISTSQLPPDSAPLSSVLAEINSRLRNSVGNMQGDNTVLSGQMQFSSRDLRSESRPAQGNEQRDTLEMSGCAASSASSVGCTSESVVEKPETEAIKTCSNDERDVLVDKFVSSSSDQALQSCSSGETMVKSEKVPDTPSASERRDVTEPAKTAPLGLGVSGLERKRRTRLQPPAGKGADGGSSSSSINRGQETRTDSQHILQTHASQGSAVINADRPSSQQPIPSGGSQIDVGGLMSQVLHSSALNGLLEGFSQQTGADSSDGLRNMLQQFTQSPQMMNTVNQIAQQVGSQDMGNMLTGMERGQGGGVDFSRMLQQMMPIVSRALGGVNPPSLFSAAEPEIQAPYRDENFDNLSLQPDLQPVAERIDRLSPPTDVFRAVAENAVQLSGSGSAAADLLDELCCNESLASEYMEMLRYDVSELLEGGSERDKS 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03621 883 MobiDBLite consensus disorder prediction 49 78 - -
Car04g03621 883 MobiDBLite consensus disorder prediction 393 465 - -
Car04g03621 883 MobiDBLite consensus disorder prediction 630 682 - -
Car04g03621 883 MobiDBLite consensus disorder prediction 49 85 - -
Car04g03621 883 MobiDBLite consensus disorder prediction 568 582 - -
Car04g03621 883 SMART ubq_7 1 52 IPR000626 GO:0005515
Car04g03621 883 MobiDBLite consensus disorder prediction 417 465 - -
Car04g03621 883 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 1 881 - -
Car04g03621 883 PANTHER OS07G0498800 PROTEIN 1 881 - -
Car04g03621 883 MobiDBLite consensus disorder prediction 568 682 - -
Car04g03621 883 Gene3D - 1 65 - -
Car04g03621 883 MobiDBLite consensus disorder prediction 127 151 - -
Car04g03621 883 MobiDBLite consensus disorder prediction 496 517 - -
Car04g03621 883 PRINTS Ubiquitin signature 33 54 IPR019956 -
Car04g03621 883 PRINTS Ubiquitin signature 12 32 IPR019956 -
Car04g03621 883 SUPERFAMILY Ubiquitin-like 2 55 IPR029071 -
Car04g03621 883 Pfam Ubiquitin family 6 53 IPR000626 GO:0005515
Car04g03621 883 ProSiteProfiles Ubiquitin domain profile. 1 56 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03621 Car-Chr4 65662806 65672946 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03621 7 52 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 52.174 1.41e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03621 - - gmx:100783611 1250.34