Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03620 ATGGGAGTCAATTTGGTTTTATTAGGTGTTTCTACTCTTTATCTGTTTACTACTACTACTATTCTTGTTCTTGCTGAAGATCCGTACAGATTCTTCGACTGGAACATTACCTACGGTGACATTTATCCACTTGGTATTCGCCAACAGGGAATACTTATCAACGGCCAATTCCCAGGTCCAGACATTCATTCTGTTACCAACGACAATCTCATTATCAACGTCTTCAACAGTTTGGACGTCCCCTTTCTCATCTCCTGGAATGGAGTTCAGCAGAGAAGGAACTCATACGAAGATGGGGTATCTGGAACAACGTGCCCGATACCTCCGGGAAAGAACTTTACATACATACTTCAAGTGAAAGATCAAATTGGGAGCTTCTACTATTTCCCATCTCTTGCATTCCACAAAGCTGCTGGTGGTTTTGGAGGAATTAGGATACTAAGTAGGCCAAGAATTCCAGTTCCCTTCGATGACCCCGCTGGTGACTACACTCTCCTCATTGGAGATTGGTACAAATCCAACCACACGGATTTGAAAGCCCAACTTGATAACGGTAAGAAGTTGCCTTTCGCTGATGGAATCCTGATCAATGGTCGTGGATCTGGCGGAGCATCTTTGAATGTGGAACAAGGAAAGACTTATAGGCTTAGAATATCAAATGTTGGGTTGGAAAATTCACTAAACTTTCGCATACAGAACCACAAGTTCAAATTGGTGGAAGTGGAAGGAACTCACACACTTCAAACCACTTACTCATCCCTTGATGTACACGTGGGTCAATCATATTCAGTTCTATTAACCGCTGATCAACCTGCTCAAGACTATTACATTGTTGTTTCCTCTCGATTTACAAATCCTGTACTCACCACCACCGGAATCCTTCGCTATAGCAATTCTGCAGGCCCAGTATCAGGCCCACCTCCTGGTGGACCCACTATCCAAATTGACTGGTCCTTGAACCAGGCCCGTTCCATTAGAACTAACTTAACTGCAAGTGGACCAAGGCCAAACCCACAAGGTTCTTACCACTACGGTATGATAAACACAACAAGAACCATCATACTTTCAAGTTCACCTGCTCAAGTCAATGGTAAACAAAGATACGCAATTAATAGTGTTTCTTATATTGCCCCTGACACTCCTCTTAAGCTTGCTGATTTCTTCAAGATCTCTGGTGTTTACCGTCCTGGAAGCATACCTGATAGACCCACTGGCGGTGGCATTTACCTTGACACCTCTGTTTTGCAAACTGACTACAGAACTTTTGTAGAGATTGTCTTCCAAAACGACGAAGACATCCTTCAGAGCTATCATCTTGATGGCTACTCTTTCTTTGTCGTTGGTATGGATGGAGGACAATGGAGCCCTGCTAGCAGGAACCAGTACAATCTTCGAGATGCAGTTTCGCGCTCCACCACTCAGGTATACCCCAAGTCATGGACTGCTATATATATTGCGCTAGACAATGTGGGAATGTGGAACTTAAGGTCTGAATTTTGGGCACGACAATACCTTGGCCAACAATTTTATATGCGTGTATACACAACATCAACCTCACTCAGAGATGAATACCCAATTCCTAAGAATGCATTACTTTGTGGTAGGGCATCTGGAAGACATACTCGACCCCTTTGA 1635 0.4361 MGVNLVLLGVSTLYLFTTTTILVLAEDPYRFFDWNITYGDIYPLGIRQQGILINGQFPGPDIHSVTNDNLIINVFNSLDVPFLISWNGVQQRRNSYEDGVSGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFDDPAGDYTLLIGDWYKSNHTDLKAQLDNGKKLPFADGILINGRGSGGASLNVEQGKTYRLRISNVGLENSLNFRIQNHKFKLVEVEGTHTLQTTYSSLDVHVGQSYSVLLTADQPAQDYYIVVSSRFTNPVLTTTGILRYSNSAGPVSGPPPGGPTIQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGMINTTRTIILSSSPAQVNGKQRYAINSVSYIAPDTPLKLADFFKISGVYRPGSIPDRPTGGGIYLDTSVLQTDYRTFVEIVFQNDEDILQSYHLDGYSFFVVGMDGGQWSPASRNQYNLRDAVSRSTTQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQFYMRVYTTSTSLRDEYPIPKNALLCGRASGRHTRPL 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03620 544 SUPERFAMILY Cupredoxins 346 535 IPR008972 -
Car04g03620 544 Pfam Multicopper oxidase 381 516 IPR011706 GO:0005507|GO:0016491
Car04g03620 544 CDD CuRO_1_AAO_like_1 31 146 IPR034273 GO:0005507
Car04g03620 544 SUPERFAMILY Cupredoxins 156 336 IPR008972 -
Car04g03620 544 Gene3D - 29 150 IPR008972 -
Car04g03620 544 Gene3D - 159 335 IPR008972 -
Car04g03620 544 SUPERFAMILY Cupredoxins 21 176 IPR008972 -
Car04g03620 544 PANTHER MULTI-COPPER OXIDASE 12 537 IPR045087 -
Car04g03620 544 CDD CuRO_3_AAO_like_1 378 498 IPR034275 GO:0005507
Car04g03620 544 Pfam Multicopper oxidase 162 298 IPR001117 -
Car04g03620 544 Gene3D - 345 540 IPR008972 -
Car04g03620 544 Pfam Multicopper oxidase 36 149 IPR011707 GO:0005507
Car04g03620 544 PANTHER - 12 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03620 Car-Chr4 65651079 65654169 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03620 - - gmx:100783077 994.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03620 04 65651079 65654169 Car04g03620 04 65651079 65654169 ECH
Car04g03620 04 65651079 65654169 Car05g03305 05 77757557 77765037 PCT