Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03601 ATGAAAATGAACAAGTTAGTGTGGGCACAATCATTAACAGTTTTTCTTGTTTTATTTTTTGAAAGAGTTATATTCATTGCAGCAACGGTGAATATAAAATATCCAGCAGTGTTTGCATTTGGAGACTCAATCCTTGATACTGGAAATAATAACGATCTTTTTTCAGTTACTAAGTCCGATTTTTCTCCTTATGGAAAAGATTTTGATGGAGGTGTGGCTACCGGAAGATTCGGAAATGGCAGAGTTCTATCTGATCTAATAACGGCGGCTATGGGAGTGAAAGACACATTACCAGCATATCTAGATAAAAATTTACAAGATAAAGATCTTCCTACTGGAGTATGTTTTGCATCAGCTGGTACAGGATTTGACGATACTACTGCACACCTTCAAAATGTATTGTCAATGGACACTCAATTGAAACATTTTCAAGATTACATTGGAAAGCTTAGAGCAGCTGTTGGAGCAGATAATGCATCTAGTATCATATCCAACGCTTTGTATGTGATATCAGGAGGAAACAATGACGTGGCAATCACTTATACTTTTACATACAAACATTTCATTTCTTTTCCTAAGTATTCCTCTGATTTAGTTGAGGCACAACGAAATTTTCTCAAGAGCATATATCAATTGGGAGCACGACATGTGTGGGTTCTAAGTACGCTTCCATTGGGGTGCTTACCTGGAGCTAGAACAACACTTGGAGGGGCATTAAGGATATGTGTAGATCTTGAGAATATGTTAGCACAACAATTCAATGGCATGTTAGCTAGTGGAGTTTCTGATCTTAAAGCCACTCTTCCCGATTATGATGTTAAATTCGTTGATGTCTATACTCCTATGCTTCGTCTCATAATGAATCCTTTTGCATCAGGGTTCATAAACGTATGGAATGGGTGCTGTGGAACTGGGACATTAGAAATGGGCCCAACATGCAATATATTCACTTTTCAATGTCCAAGTACATCAACCTACTTTTTTTGGGATTCTGCTCATCCTTCAGAGAGAGCTTATCAACTCACTCTCGCTTCGATGCTACAAAATCTAAATTATGATCTTACTAATTACAATATTTCTAAGGCTCTTGGTCACTTGAATGTAACAAGTCttaatttaatttaa 1125 0.3689 MKMNKLVWAQSLTVFLVLFFERVIFIAATVNIKYPAVFAFGDSILDTGNNNDLFSVTKSDFSPYGKDFDGGVATGRFGNGRVLSDLITAAMGVKDTLPAYLDKNLQDKDLPTGVCFASAGTGFDDTTAHLQNVLSMDTQLKHFQDYIGKLRAAVGADNASSIISNALYVISGGNNDVAITYTFTYKHFISFPKYSSDLVEAQRNFLKSIYQLGARHVWVLSTLPLGCLPGARTTLGGALRICVDLENMLAQQFNGMLASGVSDLKATLPDYDVKFVDVYTPMLRLIMNPFASGFINVWNGCCGTGTLEMGPTCNIFTFQCPSTSTYFFWDSAHPSERAYQLTLASMLQNLNYDLTNYNISKALGHLNVTSLNLI 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03601 374 CDD SGNH_plant_lipase_like 35 349 IPR035669 -
Car04g03601 374 SUPERFAMILY SGNH hydrolase 40 348 - -
Car04g03601 374 PANTHER GDSL ESTERASE/LIPASE EXL3 3 354 - -
Car04g03601 374 Pfam GDSL-like Lipase/Acylhydrolase 37 341 IPR001087 GO:0016788
Car04g03601 374 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 37 48 IPR008265 GO:0006629|GO:0016298
Car04g03601 374 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 3 354 - -
Car04g03601 374 Gene3D SGNH hydrolase 27 353 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03601 Car-Chr4 65356262 65375720 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03601 10 354 Pollen Coat Proteome AT1G75910 40.341 2.66e-79 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03601 - - mtr:MTR_1g025910 502.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03601 04 65356262 65375720 Car04g03601 04 65356262 65375720 ECH
Car04g03601 04 65356262 65375720 Car05g03281 05 77537476 77543076 PCT