Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03598 ATGAAGTTCTCAACCTATTATTTTTCGTTACCTTATGTTTCCACTTCAATATGTTTGACAATATCATTAGTTGTTTTATGCAAAACAAATGCTGCTTTGAAACTTCCACCAAATACTTCTTTTCCAGCAGTGTTTGTGTTTGGAGATTCAATCATGGATACTGGAAATAATAACAACATGACAACACCATCTAGGTGCAATTACCCTCCATATGGAAAAGATTTTCAAGGAGGAATCCCAACAGGAAGATTTGGAAATGGAAAAGTTCCATCAGACTTTGTAGCTGAAGAATTAGGCATTAAAGAATATCTTCCAGCATACTTGGATCCAAATCTCCAACCAAGTGAATTGGCCACAGGTGTAAACTTTGCATCCGGTGGGGCAGGATATGATCCTTTGACATCAAAATTAGAGGCAGCTATATCTATGTCTGGCCAGCTAGACTTATTCAAAGATTACATTGTGAAGCTTAAAAGAGTGGTTGGTGAAGATAAAGCAAATTTCATCTTAGCCAATAGTCTTTTTCTTGTGGTATTAGGAAGCAATGATATTTCTAATACTTATTTCTTGTCTCATTTGAGACAAGTGGAATATGATTTCCCTACATACTCTAACCTTTTAGTCAACTCAGCTATCAATTTCTACAAGGATATACATGAACTAGGTGCAAGGAGGATAGGAGTATTCAATGCACCACCAATGGGGTGTGTACCTTTTCAGAGAACAATGGCAGGAGGAATAGAAAGAAATTGCGTGCAACAATACAACGATGCATCTACTTTATTTAACAACATGTTGTCATTGGGGATTCATTCCTTTAAGGAGAGATTTCCAAGTAGCAGCATTGTTTACTTGGATGTCTACACTCCTCTACTTGATATCATTATAAACCACCACAAATATGGCTATAAAGTTGGAGACAGAGGATGCTGTGGTACAGGGAAAATAGAAGTTACATATTTATGCACCCAATTGGAACCCACATGTCCCAATGATTTGGATTATGTGTTTTGGGACAGTTTTCATCCTACTGAATCCGTTTACAGAAAACTTGTGCCACCTATCCTCCAGAAATACATGGACAATTTATGA 1092 0.37 MKFSTYYFSLPYVSTSICLTISLVVLCKTNAALKLPPNTSFPAVFVFGDSIMDTGNNNNMTTPSRCNYPPYGKDFQGGIPTGRFGNGKVPSDFVAEELGIKEYLPAYLDPNLQPSELATGVNFASGGAGYDPLTSKLEAAISMSGQLDLFKDYIVKLKRVVGEDKANFILANSLFLVVLGSNDISNTYFLSHLRQVEYDFPTYSNLLVNSAINFYKDIHELGARRIGVFNAPPMGCVPFQRTMAGGIERNCVQQYNDASTLFNNMLSLGIHSFKERFPSSSIVYLDVYTPLLDIIINHHKYGYKVGDRGCCGTGKIEVTYLCTQLEPTCPNDLDYVFWDSFHPTESVYRKLVPPILQKYMDNL 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03598 363 PANTHER GDSL ESTERASE/LIPASE EXL3 16 360 - -
Car04g03598 363 CDD SGNH_plant_lipase_like 42 359 IPR035669 -
Car04g03598 363 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 16 360 - -
Car04g03598 363 Gene3D SGNH hydrolase 32 359 IPR036514 -
Car04g03598 363 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 44 55 IPR008265 GO:0006629|GO:0016298
Car04g03598 363 SUPERFAMILY SGNH hydrolase 43 359 - -
Car04g03598 363 Pfam GDSL-like Lipase/Acylhydrolase 44 351 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03598 Car-Chr4 65236789 65239807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03598 38 363 Pollen Coat Proteome AT1G75910 40.729 1.03e-74 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03598 - - mtr:MTR_1g025680 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03598 04 65236789 65239807 Car04g03598 04 65236789 65239807 ECH
Car05g03281 05 77537476 77543076 Car04g03598 04 65236789 65239807 PCT