Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03575 ATGTCAGCAAAATGCAGCAAAATTCGCCACATTGTACGGCTCCGTCAGATGCTACGACGGTGGCGAAACAAAGCACGAATGTCAGCTAATCGTGCACCGTCCGATGTACCAGCAGGACACGTGGCAGTTTGTGTAGGCGCTAACTACACCAGATTTGTAGTACGCGCGACGTACCTGAACCATCCTGTTTTCCAGAAGCTTCTAATTCAAGCCGAAGAAGAGTACGGTTTCTCTAATCACGGACCCATTGCTATCCCTTGTGATGAAGCGCTTTTCGAAGAGGCTCTCCGCTTCATTTCCCGCTCCGACTCCAGCCGCTATGGTAATATCGACTTTGAAGATTTTCAGAGCCGATGCCACGTCGGAATTAGAACTAACGTCGATTTCTGGCCCGAATCTCGACCGCTACTTCACGGTCTAACTGACAAAACCATTTGGTAA 441 0.4921 MSAKCSKIRHIVRLRQMLRRWRNKARMSANRAPSDVPAGHVAVCVGANYTRFVVRATYLNHPVFQKLLIQAEEEYGFSNHGPIAIPCDEALFEEALRFISRSDSSRYGNIDFEDFQSRCHVGIRTNVDFWPESRPLLHGLTDKTIW 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03575 146 PANTHER SMALL AUXIN-UP RNA-RELATED 4 139 - -
Car04g03575 146 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 139 IPR003676 GO:0009733
Car04g03575 146 Pfam Auxin responsive protein 13 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03575 Car-Chr4 64926263 64927403 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03575 3 145 Calmodulin-binding Proteins AT4G34750 51.974 9.65e-46 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03575 K14488 - gmx:100789753 251.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03575 04 64926263 64927403 Car04g03575 04 64926263 64927403 ECH