Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03571 ATGGTGAAATCTAGTTCCTGTCTCAGATTAATCACATGCGGTAGTGGTGATGCTACTGACAAAGAAGATCACCAACTAGTTTCCGAGATCAAGGACTCTAATGATAAACGCGGCTGGAGTTTCCGGAAGAGATCTGCAAGGCATCGTGTGCTTAGCAATACTGTGATAACAGATACCCCATCTTCGGCAACTAAGGAAACTTCAGAATATTCAAGTATTAATTGTCAATCTGCGGAGGAACCTAATGTTGTTGAAAAGATTTGCACAACAAATTTCTCTAATGAGAAGCCTCAGTTATCCTCCGTCGCATGCTCAGAGATGCCAGAAACAATTGTCGCCGAAACTGAGGGTAAGGTGGATGTCAATCTTGCGGAATCTGATGTGATAATCATCCAGGCTGCCATTAGAGGATATTTGGCTCAGAGAACACTGCTAAAGAGTAAGCACGTTGTGAAGTTGCAAGCTGCTGTTCGCGGGCACTTGGTCAGGAGGCATGCTGCAGGGACATTGCGATGTGTTCAAGCTATTGTTAAAATGCAGCTCCTTGTGCGAGCACGACACGCTAAACAGTCACATTCAGATGATAATTTGAATCACAGTGATAGCAAAAATGATTACTCAAAAACTTTGGATAATGAGCATCACATGGCCAAATCAAATGTGAAGCACACTTCTGTGGAAAAGCTTCTCAGCAATAAGTTTGCTCGTCAGATGTTGGAATCAACCCCAAAAAACAAACCTATCCATGTCAAATGTGATCCTTCTAAAGGCGATTCTGCTTGGAAATGGTTGGAGAGATGGATGACTGTTTCAGCAAAAGATTCTGCAGAGAATAAAAAGCCGATTTATATGTCGGAACAGTCAGATGAAACCAAAGATAGCACTCGTGTATCTCAATCGGAAACAGGTATTCCATCCCAAGTGATTCTTCAGTTAGCCGACTCAAAGCCTACTGTTCGGATTACAAATGATGCTAAAGAAACCTCCACTGAAATTGATTCTTTCCAAAATGAAATAATGGAATCAAATGCAAGTGTTCCACAGGAGCCTCAAATTGATGAGCAGTGCGAACAATCTACTAAAGCATTTGCCTCTGACCAACTTGAGATTGACGGAAAGAAATTTGCCGGTGGATCAAGGAAGTTAAGTAATCCTGCATTTATCGCCGCTCAATCAAAATTTGAAGAGCTGAGTTCAATGGCAAATTCTAGTAGGCCAAGCAGTTTGTTCAGTCAAGATGTATCGGTTGATTCACAAGCAGACACCTCTTCAGTTGCAGATACTGCATATATATCAAAAGAATTTGTCTCATCTGAGAATTCTGCTCTCTATCCTTCCAAAATTGGTGATTCTGAATATGGTACTGTACTCTCTATTTCATCAACTCTTGATTCGCCTGACATATCCGAGGTTGAGACTTTAGGAAGCGAGCATGATGCCAAAGATTTAGCAGAAGGGATAGTTAATCCTGAAAACACAATTGATCACGGTGTTTTGGCCAAGACTCCTCGTGCCACTCCGACTTCTAACTTAGCTATCTCTGATTCGGATCAATTAGAATATGTTAATGACTCCAGTGGTAATATTGTTGATTCAGTGATGCCTGAAAACTCCAAAGAGCCTGAGAAAAATGCATCTGACCTGTTAAGTGAACAGACAGAGAATGTCCTGCAGGATTTCAAGTTGTCTCTAGAAGCTTCACCGGGAAGCCATATTACCATTCCTGAATCTCAAGGAACACCTTCGAGTCAGGTTTCGGTGAAACCTAAAGAGAACAAAATCAAAAAGACTGGATCAAGCAGTAGACGTAGGGCACTGTCTGTCGGTAACAAGTCGCCTGCAAATGCAAATCAGGATTCAGGCTCAAGAGCGTTGGTCGGTAACAAGTCTCCTGCAAATGCAAATCATGATTCAAGCTCGAGAGTGTCAGTTGGTAACAAGTCTCCTGCAAATGCAAATCATGATTCAGGCTCGAGAGTGTCGGTCGGTACCAAGTCTCCTGCAAATGCGAATCACGATTCGGGTTCAAGAGGCAGTAGAGAACAATTGCCTAAGGATCAGCTGAACGGAAAGAGGCGCAATTCCTTTGGCTCAGTAAAACCTGATCATGCTGAACAAGAACCTAGAGATAACAGTAGTAACAATAGTTCTCTTCCTCGTTTCATGCAAGCTACAGAGTCCGCTAGGGCAAAGCTAAATGCAAATTCTTCTCCAAGATCAAGTCCAGATGTACATGACCATGACCTTAAGAAGAGACATTCCTTACCTGGTGCAACTGGTAGGCAGGGTTCTCCACGTGTTGAACAGTCATTACCTCAAGCTCAGCACGGCACAAAGGGCAGTGGCGTAAATGCTCATTCTGAGAGAAAATGGCAGAGACATAAATATAGAAAGACTAGAACTAGAAAGTTGGTGTGTCTGGAAATACATTCAGGTTTTGTTGGGCAACTATTCTTACGGCAACTCGGTATGGAATACAAGATAGACACCGCAGATAAGAAGGTGCTGGTTGATATTGTAAAATTGGCACAAAAAAGAGGCATGAAGGGTAAAATGGGAGATTGGAAAGAATTCTTGAGCAGTCATGATAAACAGTTTGGGGCACGTATGAGTGATCCATCAAAGAAGCCCCATGAAGTTTTGGCTGCATTTCTAAAGACATTCTCAAAGGACGAGGATTTGAAGGTAAATATCCTCCTTTTCTTAAGATGTAGCCTACAAGGTGAACCTTACCCATTTTCTTCTTGTGCTCAGTTTTTTAATAACGTCATGAAGCATCATTCAAATCAATACATCTTAGAGCGGCTGAAAGAAAGATCTCATGATTCCCCCGAGCAGAGTCTAGTCCAAGAAACTCTCCAGCACCCACTGTATCCATTGGATTATTCATTTCCATCAATTGACGAGGGATGGTTAGTGATAAGCCTTAAAAGAAAATCCAAGGGGGTAAGATCTACTACAATGCTTGCTGTTGATTGTGAAATGGTTCTCTGTGAAGATGGGACCGAAGCTTTAGTCAAAGTTTGTGTTGTAGATCACAATTTAGAGGTCAAACTACACAAACTTGTTAAACCGGACAAATCAGTCATAGACTACAGAACAGAGATTACTGGTGTCTCTTCTGAAGATCTAAAGACAGTGACTTGCTCCTTAGCTGATATACAGAAATCACTGAGGAAGTTAATCGATGGAAACATATTAGTGGGACACAGTTTATATAATGATCTACGTGTGCTGAAGATAGATTATGTTAGAGTAATTGACACCGCATATATCTTCAAACCCGTGGATGGATCTATTCACAGGAGACCGTCTTTGAATAGTTTATGTCAGGCAATTCGGCAAAAGGATGCTCCACATGATTGTCTAGATGATGCAAGTGCAACAATGAAACTTGTTCTTGCAAGGATCAAACACGGCGTTGATAAGCCATTTCCATTGACGTTGGTTCAAGAGCAAGTTTCAGAGAGTGAGATGACAAAGCTGCTTCTTCACAGAATACCAACTACTGTGAACAAGGAAGCACTACATGAAATTATTCCTGGAGATTTCACACTAGAAGTAAAGCCTCCCAGGAATGGTCAAGGAGATATCTATTCTGCTGTAGCTATCTTTAAGAACCATCAAGAGGCAGGTGATGCATATGAAAGTTTCCAAGGCAGCCTAACAAAGGATTCAAATGGGCGTCCACAGAAATCGGTCACATTTCGGCTGAGTACGGGCACAAGTGTCAGTCTATTTGTTCGGAGATTGCCAAGTCATGCACACCGCAAGAGAGATTTTCAAGTGGATGGAACAGATGATGTTTCCAAGAACAAGAAAATAAAAATGGATCCTGAAGTTGAAAAGGATGCCCTGAATGCAGTTGATGATTCCAAGGAAGTAAAAGTGGATCCTGAAATTGAAAAGGAGATTGAAGACGCCCACTTGAAGGAGATTGAAGCACTGAATCAACAATTGAAAGAAAGAGAATTGGAGATTGAATCATTGAAGGAACAGTTGAGAAAAAAGGATTTTGAAATCACTACACTGCATAATATGGTAGCTAAAATAAAAAAGCGACAGCCTAAAATACGCTAG 4080 0.4147 MVKSSSCLRLITCGSGDATDKEDHQLVSEIKDSNDKRGWSFRKRSARHRVLSNTVITDTPSSATKETSEYSSINCQSAEEPNVVEKICTTNFSNEKPQLSSVACSEMPETIVAETEGKVDVNLAESDVIIIQAAIRGYLAQRTLLKSKHVVKLQAAVRGHLVRRHAAGTLRCVQAIVKMQLLVRARHAKQSHSDDNLNHSDSKNDYSKTLDNEHHMAKSNVKHTSVEKLLSNKFARQMLESTPKNKPIHVKCDPSKGDSAWKWLERWMTVSAKDSAENKKPIYMSEQSDETKDSTRVSQSETGIPSQVILQLADSKPTVRITNDAKETSTEIDSFQNEIMESNASVPQEPQIDEQCEQSTKAFASDQLEIDGKKFAGGSRKLSNPAFIAAQSKFEELSSMANSSRPSSLFSQDVSVDSQADTSSVADTAYISKEFVSSENSALYPSKIGDSEYGTVLSISSTLDSPDISEVETLGSEHDAKDLAEGIVNPENTIDHGVLAKTPRATPTSNLAISDSDQLEYVNDSSGNIVDSVMPENSKEPEKNASDLLSEQTENVLQDFKLSLEASPGSHITIPESQGTPSSQVSVKPKENKIKKTGSSSRRRALSVGNKSPANANQDSGSRALVGNKSPANANHDSSSRVSVGNKSPANANHDSGSRVSVGTKSPANANHDSGSRGSREQLPKDQLNGKRRNSFGSVKPDHAEQEPRDNSSNNSSLPRFMQATESARAKLNANSSPRSSPDVHDHDLKKRHSLPGATGRQGSPRVEQSLPQAQHGTKGSGVNAHSERKWQRHKYRKTRTRKLVCLEIHSGFVGQLFLRQLGMEYKIDTADKKVLVDIVKLAQKRGMKGKMGDWKEFLSSHDKQFGARMSDPSKKPHEVLAAFLKTFSKDEDLKVNILLFLRCSLQGEPYPFSSCAQFFNNVMKHHSNQYILERLKERSHDSPEQSLVQETLQHPLYPLDYSFPSIDEGWLVISLKRKSKGVRSTTMLAVDCEMVLCEDGTEALVKVCVVDHNLEVKLHKLVKPDKSVIDYRTEITGVSSEDLKTVTCSLADIQKSLRKLIDGNILVGHSLYNDLRVLKIDYVRVIDTAYIFKPVDGSIHRRPSLNSLCQAIRQKDAPHDCLDDASATMKLVLARIKHGVDKPFPLTLVQEQVSESEMTKLLLHRIPTTVNKEALHEIIPGDFTLEVKPPRNGQGDIYSAVAIFKNHQEAGDAYESFQGSLTKDSNGRPQKSVTFRLSTGTSVSLFVRRLPSHAHRKRDFQVDGTDDVSKNKKIKMDPEVEKDALNAVDDSKEVKVDPEIEKEIEDAHLKEIEALNQQLKERELEIESLKEQLRKKDFEITTLHNMVAKIKKRQPKIR 1359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03571 1359 MobiDBLite consensus disorder prediction 570 588 - -
Car04g03571 1359 SMART iq_5 123 145 IPR000048 GO:0005515
Car04g03571 1359 SMART iq_5 146 167 IPR000048 GO:0005515
Car04g03571 1359 MobiDBLite consensus disorder prediction 710 740 - -
Car04g03571 1359 Coils Coil 1303 1340 - -
Car04g03571 1359 MobiDBLite consensus disorder prediction 601 677 - -
Car04g03571 1359 MobiDBLite consensus disorder prediction 741 755 - -
Car04g03571 1359 ProSiteProfiles IQ motif profile. 146 175 IPR000048 GO:0005515
Car04g03571 1359 MobiDBLite consensus disorder prediction 488 552 - -
Car04g03571 1359 SUPERFAMILY Ribonuclease H-like 988 1138 IPR012337 -
Car04g03571 1359 MobiDBLite consensus disorder prediction 188 208 - -
Car04g03571 1359 PANTHER PROTEIN IQ-DOMAIN 32 1 788 - -
Car04g03571 1359 SMART exoiiiendus 987 1142 IPR013520 -
Car04g03571 1359 Gene3D - 983 1145 IPR036397 GO:0003676
Car04g03571 1359 MobiDBLite consensus disorder prediction 503 533 - -
Car04g03571 1359 Gene3D - 125 172 - -
Car04g03571 1359 Pfam IQ calmodulin-binding motif 128 143 IPR000048 GO:0005515
Car04g03571 1359 Pfam IQ calmodulin-binding motif 150 165 IPR000048 GO:0005515
Car04g03571 1359 MobiDBLite consensus disorder prediction 763 782 - -
Car04g03571 1359 Pfam Protein of unknown function (DUF4005) 704 762 IPR025064 -
Car04g03571 1359 PANTHER IQ-DOMAIN 5-RELATED 1 788 - -
Car04g03571 1359 MobiDBLite consensus disorder prediction 283 303 - -
Car04g03571 1359 CDD REX1_like 989 1134 IPR034922 -
Car04g03571 1359 Pfam Exonuclease 990 1132 IPR013520 -
Car04g03571 1359 ProSiteProfiles IQ motif profile. 124 152 IPR000048 GO:0005515
Car04g03571 1359 MobiDBLite consensus disorder prediction 567 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03571 Car-Chr4 64841173 64855806 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03571 114 793 IQD Protein Family AT1G19870 33.745 9.42e-83 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03571 - - cam:101492650 1528.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03571 04 64841173 64855806 Car04g03571 04 64841173 64855806 ECH