Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03567 ATGGAAAGAGATAATGCAATAGCAACAACCCTTCAGTTTCGAGAAAACGCTTTGGCCAATGGCGGTATGTTATCATGCCCTCCAGGATGCCAAATCTCACGGGGAGTTAAGCATATTCATCATCTACCGCAACAGGTAAACCATTTGCCTAATATGGGTGATTCTTCTTATGGAACACGCGAACTTCACACAACCAATGCCCTCCCAGAAGCACCCATTCCCGCAGAGGTTGGGAAACCTACTCGGCGGGCCAAACGACCAAAGGAAAGTAAGTCTGTTTCACCCAACAAGAAGACTCCAAAAACTACTAGAAAGGTCAAGAAGGAGAGTGAAGATTTAAACAAGACAATGTTTGCCAACAACAAAACACTTGAATGGAAGAGTAGTCAGGACATTATGAACGGAGGCGATGATCTTAACAAGCAGATAGCTGTCTCAAAGGCTGATTGGAAACCTCAGGACCTGGCATTGAACCAAGTTGCATACGATGATTCAACTATGCCAGCACCCGTGTGCTCGTGTACTGGTGTTCTGAGACAGTGCTACAAATGGGGTAATGGAGGTTGGCAATCTGCTTGTTGCACAACCACTTTATCGGTGTATCCACTTCCAGCCGTTCCCAACAAGAGGCATGCTCGAATAGGCGGTAGAAAAATGAGTGGAAGTGCATTCAATAAACTACTTAGCCGGCTTGCAGCTGAAGGACACGATCTCTCACACCCAGTTGACCTTAAAGACCATTGGGCCAAACATGGAACAAATCGATATATCACAATAAAGTAG 783 0.4547 MERDNAIATTLQFRENALANGGMLSCPPGCQISRGVKHIHHLPQQVNHLPNMGDSSYGTRELHTTNALPEAPIPAEVGKPTRRAKRPKESKSVSPNKKTPKTTRKVKKESEDLNKTMFANNKTLEWKSSQDIMNGGDDLNKQIAVSKADWKPQDLALNQVAYDDSTMPAPVCSCTGVLRQCYKWGNGGWQSACCTTTLSVYPLPAVPNKRHARIGGRKMSGSAFNKLLSRLAAEGHDLSHPVDLKDHWAKHGTNRYITIK 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03567 260 MobiDBLite consensus disorder prediction 48 63 - -
Car04g03567 260 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Car04g03567 260 Pfam GAGA binding protein-like family 30 260 IPR010409 -
Car04g03567 260 PANTHER - 1 260 IPR010409 -
Car04g03567 260 SMART GAGA_bind_2 1 260 IPR010409 -
Car04g03567 260 MobiDBLite consensus disorder prediction 79 95 - -
Car04g03567 260 PANTHER PROTEIN BASIC PENTACYSTEINE6 1 260 - -
Car04g03567 260 MobiDBLite consensus disorder prediction 46 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03567 Car-Chr4 64810201 64810983 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03567 1 260 BBR or BPC Transcription factor family AT5G42520 61.372 2.32e-104 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Car04g03567 GAGA_bind 9.5e-88 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03567 - - mtr:MTR_1g023660 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03567 04 64810201 64810983 Car04g03567 04 64810201 64810983 ECH