Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03553 ATGGCTGATCCAAGTTCAGCATCTTCTAAGAGAATGTGGTGTTACATTCCTGAAAGATTTCAACTCCATGTGGCCATGTTGGCCTTGCAGTTTGGTTATGCTGGTTTCCATGTTGTCTCAAGAGCTGCCCTTAACATGGGAGTTAGCAAATTTGTTTTCCCTGTTTATAGGAACATCATTGCTTTGCTTCTCCTTCTTCCCTTTGCTTATTTTTTGGAAAAGAAGGATAGACCTCCGATTAGTTTAAACTTCCTCTGCCAGTTCTTTTTTCTAGCACTAATTGGGATTACAGCAAATCAAGGATTTTACTTGCTTGGATTGGACAACACATCTCCAACGTTCGCATCAGCAATACAAAACTCTGTACCTGCCATTACATTTCTAATGGCAGTAATACTAAGGATAGAGCAAGTGAGATTGAATAGAAAAGATGGATTGGCAAAGGTAGCAGGAACAATATTTTGTGTAATTGGGGCAACAGTGATAACATTATACAAAGGTCCAACAATATATAGTCCTACAAATGATAACATGAAAACAACAATGATGGTTGATTTTGGAACAATGTCCCTTGGTGATGCAAAGGGAAAGAATTGGACACTTGGATGTGTCTATTTAATAGGACATTGTTTGTCATGGTCTGGTTGGCTTGTTTTTCAAGCACCTGTACTTAAGAAGTACCCTGCAAGACTTTCTGTTACTTCTTATACATGTTTCTTTGGTCTCTTGCAATTTCTTTTTATTGCTTTGCTTGCTGAAAGAAATTCTCAAGCTTGGATTTTTCACTCTGGTGGTGAAGCTTTCACTATTTTATATGCGGGAGTGGTAGCATCTGGAATTGCATTTGCAGTACAAATATGGTGTATTGATAGAggaggtcctgtttttgttgctgtgtatcaacctgttcagacttttgttgttgctattatggcttctattgctTTAGGAGAACAATTCTATTTGGGAGGGATAATTGGGGCAGTGTTGATTGTAACTGGACTATACCTTGTGTTGTGGGGTAAAAGTGAAGAGAAGAAATTTGCATTAATTGGATCATCCACTACAGAACATAGCATCATTAGGCCCACAAGCCACACTAAAGCATCACTTGCTCAGCCACTTCTCAATTCTTCACAAGAAAATGTCTAA 1152 0.3594 MADPSSASSKRMWCYIPERFQLHVAMLALQFGYAGFHVVSRAALNMGVSKFVFPVYRNIIALLLLLPFAYFLEKKDRPPISLNFLCQFFFLALIGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAVILRIEQVRLNRKDGLAKVAGTIFCVIGATVITLYKGPTIYSPTNDNMKTTMMVDFGTMSLGDAKGKNWTLGCVYLIGHCLSWSGWLVFQAPVLKKYPARLSVTSYTCFFGLLQFLFIALLAERNSQAWIFHSGGEAFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVAIMASIALGEQFYLGGIIGAVLIVTGLYLVLWGKSEEKKFALIGSSTTEHSIIRPTSHTKASLAQPLLNSSQENV 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03553 383 Pfam EamA-like transporter family 26 163 IPR000620 GO:0016020|GO:0016021
Car04g03553 383 Pfam EamA-like transporter family 201 339 IPR000620 GO:0016020|GO:0016021
Car04g03553 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 343 - -
Car04g03553 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
Car04g03553 383 PANTHER WAT1-RELATED PROTEIN 14 354 IPR030184 GO:0016021|GO:0022857
Car04g03553 383 PANTHER WAT1-RELATED PROTEIN 14 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03553 Car-Chr4 64661454 64664905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03553 1 383 Nodulin-like Gene Family AT1G75500 73.146 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03553 - - gmx:100792395 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03553 04 64661454 64664905 Car04g03553 04 64661454 64664905 ECH
Car04g03553 04 64661454 64664905 Car05g03241 05 77167776 77171571 PCT