Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03534 ATGTACATGTTACTAATAATTTCAGTCACAGAGACATTAAATTCAGAGTTATGGCATGCTTGTGCTGGCCCACTTGTATCCTTGCCTCATGTAGACAGTCCGGTGTATTACTTCCCTCAAGGCCAAATCGAACAGGGGGCTGCTCCCACCACAAGGATTCCCAACTATCCCAATCTTCCATCTCAGTTGTTGTGCCAAGTCCAAAACCTCACACTTCATGCCGACAAAGAAACAGAAGAAATCTATGCACAAATGACCCTCCAACCATTGCATCATGATGTATTCATTGAGGTCAATAATCTATCTCCTTTACCTTCGGTTGGGTTAAAGGCCAATGGTAGCAAGCATCTCTTCTGCAAAACTTTAACTGCTAGTGACACCTGCAAACGCAGTGGCAGCTTAGTGGTGCCACAGACGGCAGCAGAGGACCTCTTTCCACCCCTGGATTACACAGTTCAACCAACAATTCAGACTCTTATTTTCCGAGATTTGCATGGTAGCCCGAAGAGGCACGTTCTCGGTAAAGGTTGGAGTGATTTTGTTAAATCAAAAAGGCTTAAAGCAGGAGATTCTGTAAATCTTACAAAAATAGGGAGTAACATTTAA 606 0.4356 MYMLLIISVTETLNSELWHACAGPLVSLPHVDSPVYYFPQGQIEQGAAPTTRIPNYPNLPSQLLCQVQNLTLHADKETEEIYAQMTLQPLHHDVFIEVNNLSPLPSVGLKANGSKHLFCKTLTASDTCKRSGSLVVPQTAAEDLFPPLDYTVQPTIQTLIFRDLHGSPKRHVLGKGWSDFVKSKRLKAGDSVNLTKIGSNI 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03534 201 CDD B3_DNA 116 200 IPR003340 GO:0003677
Car04g03534 201 PANTHER AUXIN RESPONSE FACTOR 5 8 192 - -
Car04g03534 201 Gene3D - 115 200 IPR015300 -
Car04g03534 201 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 8 192 IPR044835 GO:0003677|GO:0006355|GO:0009725
Car04g03534 201 Pfam B3 DNA binding domain 118 195 IPR003340 GO:0003677
Car04g03534 201 SUPERFAMILY DNA-binding pseudobarrel domain 114 198 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03534 Car-Chr4 64489978 64491745 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03534 13 192 B3 DNA Binding Superfamily AT1G19850 59.204 8.73e-68 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Car04g03534 B3 7.8e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03534 K14486 - cam:101490719 340.502