Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03533 ATGTACATGTTACTAATAATTTCAGTCACAGAGACATTAAATTCAGAGTTATGGCATGCTTGTGCTGGCCCACTTGTATCCTTGCCTCATGTAGACAGTCCGGTGTATTACTTCCCTCAAGGCCAAATCGAACAGGGGGCTGCTCCCACCACAAGGATTCCCAACTATCCCAATCTTCCATCTCAGTTGTTGTGCCAAGTCCAAAACCTCACACTTCATGCCGACAAAGAAACAGAAGAAATCTATGCACAAATGACCCTCCAACCATTGCATCATGATGTATTCATTGAGGTCAATAATCTATCTCCTTTACCTTCGGTTGGGTTAAAGGCCAATGCTAGCAAGCATCTCTTCTGCAAAACTTTAACTGCTAGTGACACCAGCAAACGCAGTGGCAGCTTAGTGGTGCCACAGACGGCAGCAGAGGACCTCTTTCTACCCCTGGGGGCTGCTCCCACCACAAGGATTCCCAACTATCCCAATCTTCCATCTCAGTTGCTGTGCCAAGTCCAAAACCTCACACTTCATGCCGACAAAGAAACAGAAGAAATCTATGCACAAATGACCCTCCAACCATTGCATCATGATGTATTCATTGAGGTCAATAATCTATCTCCTTTACCTTCGGTTGGGTTAAAGGCCAATGCTAGCAAGCATCTCTTCTGCAAAACTTTAACTGCTAGTGACACCAGCAAACGCAGTGGCAGCTTAGTGGTGCCACAGACGGCAACAAAGGACCTCTTTCCACCCCTGGTACGTTATTATATATATCACTATAGTATGTATGCTGATAGTCAACACTCATCACATCCATCGTCAATCCTTTTTGCTGATAATATGCACATTGATGTGCTTGCTGCTGCTGCTAATAGAAGTCCATGGACCGTTGTATACAATCCAAGAGCATGCACTTCAGAATTTGTTATTCCACTTGTTAAATACAACAAAGCTTTACGTACGCCTGAACTGTCAATTGGCTTGAGATTTGGTATGATGTTTGAGACAGAAGAATTTGGTACGCGCAGATATTTGGGTACAATAGTCGGCATCAGTGATTTGGATCCTCTAATGTGGCCTGATTCTAAATGGAAAAATATTCAGGTCGAGTGGGACCAGCCAGGTTGTGGGGAAAAGCCCAATAGATGTGTCTACCTAAATCACGGTGTAGTTCTCGCAGGTGTTGTCCCTCAGTTTGTGCAGTTTTTAGCAGTGGATGATATACCTCAACTGCAGGCTATCGCAGCATGGGCTTTTTTCAACATAGCATTAGAAACATCTGAGCATACGAGACTTTTAATTAAACACGGCGTTGTTCACCTGCTTGTGAAGCTTCTGAGCTCTAGTAGTGATGACAACAAAGAAATGGCAGTATTAGCATTAGGTAGTATCGCCAATGATTCCCCGAGCACAAGGGATGATGTTCTTAATAATGGTGCACTCTTGCCATTATTGTCTTTGTTGTTGAATCCATCTACAGCAAAGTTATCTATGTTGAAGAATGCTACATGGACTTTATTAAAGTTGTGCCGTGGAAAGCCTCCTTCTCCCACACTTATTGAACAGATACGGCCTACGTTGTCTGTCCTTCGGGAACTCTTGTGGATGCCTGATGAAGAAGTTGTACAAAATGCATGCCTGATTCTCTCTTTCATCACTCATGAGGGGTCAAGCGAAACGGTCCAAGCTGTCATTAAAGCAAATATTTGCCCAAGACTCGTGGAGTTACTATTGCAAGTCCTTGATAGATTGCAATACCCTGTGTCTTTCTTTTTAGTAAAACTTAACACTCCTGTGGGTGGCTTCATCAATGTTTTCTTTTTCTGTGGTGGACTGACTAAATTTCCTTTTTACAGGTTTCCTATGTCAAAATTTATTGTGCCTGCTTTGCAGACTCTAGGACATATTGCTTCTGGTGATGAGGCTCAGACTCAGATTCTAATTAACAGTGGAGCTCTTCTTTGTCTTAAACTACTTCTTACACAAAGTGACAAAATCATTCTCAAAATAGCTTGTTTGGTTATTTCAAACATCACAGCAGGGACAGAAGCTCAAATACAGGCTGTCATTGATTTTGATCTTATCGGTCGTCTTGTTTATCTTACGAAGGCTGAATTTGACATTAGAAAGGAGGCTGCATGGGCTATTTCCAATGCTACTTACGGAACTTGTGAGCAAATTCGGTCCTTCGCAAGTAAAGAGTGCATCAAGGCTCTCTATGATCTCTTGACCTATCCAGACCCGGAAATTGTAACAGTTTGTCTGAAAGGGCTGGAAAACATCTTAAACGCAGGAGAAATTAACAAGGAAAGGGGACTACATTATGGGGTCAATATTTATGCTAAATATTCACAAAATCTTCACAAAGAAAGTTGCAAAAGTCTTAACCTAATGGAATGA 2397 0.4218 MYMLLIISVTETLNSELWHACAGPLVSLPHVDSPVYYFPQGQIEQGAAPTTRIPNYPNLPSQLLCQVQNLTLHADKETEEIYAQMTLQPLHHDVFIEVNNLSPLPSVGLKANASKHLFCKTLTASDTSKRSGSLVVPQTAAEDLFLPLGAAPTTRIPNYPNLPSQLLCQVQNLTLHADKETEEIYAQMTLQPLHHDVFIEVNNLSPLPSVGLKANASKHLFCKTLTASDTSKRSGSLVVPQTATKDLFPPLVRYYIYHYSMYADSQHSSHPSSILFADNMHIDVLAAAANRSPWTVVYNPRACTSEFVIPLVKYNKALRTPELSIGLRFGMMFETEEFGTRRYLGTIVGISDLDPLMWPDSKWKNIQVEWDQPGCGEKPNRCVYLNHGVVLAGVVPQFVQFLAVDDIPQLQAIAAWAFFNIALETSEHTRLLIKHGVVHLLVKLLSSSSDDNKEMAVLALGSIANDSPSTRDDVLNNGALLPLLSLLLNPSTAKLSMLKNATWTLLKLCRGKPPSPTLIEQIRPTLSVLRELLWMPDEEVVQNACLILSFITHEGSSETVQAVIKANICPRLVELLLQVLDRLQYPVSFFLVKLNTPVGGFINVFFFCGGLTKFPFYRFPMSKFIVPALQTLGHIASGDEAQTQILINSGALLCLKLLLTQSDKIILKIACLVISNITAGTEAQIQAVIDFDLIGRLVYLTKAEFDIRKEAAWAISNATYGTCEQIRSFASKECIKALYDLLTYPDPEIVTVCLKGLENILNAGEINKERGLHYGVNIYAKYSQNLHKESCKSLNLME 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03533 798 Gene3D - 210 318 IPR015300 -
Car04g03533 798 Gene3D - 107 187 IPR015300 -
Car04g03533 798 Pfam Auxin response factor 286 367 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Car04g03533 798 SUPERFAMILY DNA-binding pseudobarrel domain 210 257 IPR015300 -
Car04g03533 798 Pfam Armadillo/beta-catenin-like repeat 426 464 IPR000225 GO:0005515
Car04g03533 798 Pfam Armadillo/beta-catenin-like repeat 470 510 IPR000225 GO:0005515
Car04g03533 798 Gene3D - 322 382 - -
Car04g03533 798 PANTHER AUXIN RESPONSE FACTOR 5 152 253 - -
Car04g03533 798 PANTHER AUXIN RESPONSE FACTOR 5 8 148 - -
Car04g03533 798 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 263 382 IPR044835 GO:0003677|GO:0006355|GO:0009725
Car04g03533 798 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 152 253 IPR044835 GO:0003677|GO:0006355|GO:0009725
Car04g03533 798 SUPERFAMILY ARM repeat 391 768 IPR016024 -
Car04g03533 798 SMART arm_5 467 510 IPR000225 GO:0005515
Car04g03533 798 SMART arm_5 681 720 IPR000225 GO:0005515
Car04g03533 798 SMART arm_5 425 465 IPR000225 GO:0005515
Car04g03533 798 SMART arm_5 515 553 IPR000225 GO:0005515
Car04g03533 798 SMART arm_5 556 596 IPR000225 GO:0005515
Car04g03533 798 SMART arm_5 382 423 IPR000225 GO:0005515
Car04g03533 798 SMART arm_5 722 762 IPR000225 GO:0005515
Car04g03533 798 SMART arm_5 639 679 IPR000225 GO:0005515
Car04g03533 798 PANTHER AUXIN RESPONSE FACTOR 5 263 382 - -
Car04g03533 798 Gene3D - 383 793 IPR011989 -
Car04g03533 798 SUPERFAMILY DNA-binding pseudobarrel domain 107 148 IPR015300 -
Car04g03533 798 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 8 148 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03533 Car-Chr4 64468766 64484486 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03533 13 381 B3 DNA Binding Superfamily AT1G19850 48.698 8.72e-93 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03533 K15042 - cam:101490719 657.136