Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03506 ATGTTTAATCTTTGGGGTAATTCTCAACAAGATCAACAAAGCAACGAGGTTTATGGTGAATCCAAGATTAAAGAGCTCAAGGTTGCAATTGGACCCTTAACAGGACATAGTTTTAAGTACTGCACTGATGCTTGTTTGAAGAGATATCTTGAAGCTCGAAATTGGAATGTCGACAAGTCGAAGAAGATGTTGGAAGATACACTCAAGTGGAGATCAGCCTATAAGCCCGAGGAAATTCGTTGGGATGAGGTTGCAATTGAAGGGGAGACTGGCAAAGTTTATAGAGCAGGTTTCCATGACAGACAAGGAAGGACTGTTCTTATTTTGAGACCTGGAATGCAGAACACTTCTTCAATGGAGAATCAGATAAAGCATCTTGTGTATCTTTTGGAAAATGCTATGCTTAACCTTCCACCAGGTCAAGAACAAATGGCTTGGTTGATAGACTTCACTGGTTGGTCATTGACCAACAATGTGCCCCTCAAATCAGCCAAAGAAACCATCAGCATTCTACAGAATCACTATCCTGAGAGGCTTGGCATAGCATTTCTTTATAACCCTCCTCGAATTTTTGAAGCTTTTTGGAAGATAGTGAAGTATTTCTTGGACAACAAGACATTTCAGAAGGTGAAATTTGTGTACCCCAAGAATAAAGATAGTGTGGAACTCATGAGGTCTTACTTTGATGAAGAAAATCTTCCTAGTGAACTAGGTGGAAAAAGCATATTGAACTATAACCATGAAGAGTTCTCCAAATTAATGGCTCAAGATGATTTGAAATGTGCTGATTTTTGGGGTTCTGATGAAAAGATCTCAAACCTCAGGCATTGTGCAGCAGAGGTAGCTCCAGAACCAGTTTGCAATGAAACTCCAGCTACCTGA 882 0.4002 MFNLWGNSQQDQQSNEVYGESKIKELKVAIGPLTGHSFKYCTDACLKRYLEARNWNVDKSKKMLEDTLKWRSAYKPEEIRWDEVAIEGETGKVYRAGFHDRQGRTVLILRPGMQNTSSMENQIKHLVYLLENAMLNLPPGQEQMAWLIDFTGWSLTNNVPLKSAKETISILQNHYPERLGIAFLYNPPRIFEAFWKIVKYFLDNKTFQKVKFVYPKNKDSVELMRSYFDEENLPSELGGKSILNYNHEEFSKLMAQDDLKCADFWGSDEKISNLRHCAAEVAPEPVCNETPAT 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03506 293 CDD SEC14 89 240 IPR001251 -
Car04g03506 293 Pfam CRAL/TRIO domain 89 239 IPR001251 -
Car04g03506 293 SUPERFAMILY CRAL/TRIO N-terminal domain 20 83 IPR036273 -
Car04g03506 293 Gene3D - 5 272 IPR036865 -
Car04g03506 293 SMART sec14_4 87 242 IPR001251 -
Car04g03506 293 Pfam CRAL/TRIO, N-terminal domain 42 66 IPR011074 -
Car04g03506 293 PANTHER GH16843P 7 292 - -
Car04g03506 293 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 81 245 IPR001251 -
Car04g03506 293 PANTHER RANDOM SLUG PROTEIN 5-LIKE 7 292 - -
Car04g03506 293 SMART CRAL_TRIO_N_2 42 67 IPR011074 -
Car04g03506 293 SUPERFAMILY CRAL/TRIO domain 81 251 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03506 Car-Chr4 64275543 64278852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03506 46 234 Acyl Lipid Metabolism Gene Families AT1G55840 27.053 1.40e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03506 - - aprc:113847293 519.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03506 04 64275543 64278852 Car04g03506 04 64275543 64278852 ECH