Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03487 ATGGCCTCAAATCTAAACTCAAAAACATTTCTTCTCTTCAACATGCTTCTCCTATTAGGTAATTTAGCATCTGCTACGGTGTTTACCATACAAAACCAATGCAGTTACACAATTTGGCCCGGAACTCTTTCAGGCAACGGTGCCGCGGTTCTCGGTCAAGGCGGTTTTGTCCTACCACCCGGTGCATCGATTAACCTGAATGCACCGGCAGGCTGGTCTGGACGCTTCTGGGCTCGAACCGGCTGCAAATTCGACGATGCAGGCACTGGAAAATGTCTTACCGGTGACTGTCCCGGCGGACTAAACTGCAACGGAGGAGGTACTCCACCGGTGACATTGGCAGAATTCACCATTGGATCAGCCGATAATGGCGGCAAAGACTTCTACGACGTGAGCTTGGTCGACGGTTACAATGTAGGTATGGGTGTATGGGCTACCGGCGGAACCGGTGATTGCCAGTACGCCGGTTGCATTGCGGACTTGAACCGTGTTTGTCCAACGGAACTTAGGATCAATGACGGCGGTTCCGGTGCGGTGGTGGCATGTAAGAGTGCGTGTTTGGCTTTTAATACAGAAGTATTTTGTTGCACCGGCAAACATTCGACGCCGGATAGATGTTCGGCGACGCATTATTCGGAGATATTTAAGAAAGCGTGTCCAACTGCTTACAGTTATGCTTATGATGATGCTTCAAGCACATGCACGTGTTCTGGTTCAGATTACCGTATCACGTTTTGCCCCAAGGGAACATCATAG 756 0.4987 MASNLNSKTFLLFNMLLLLGNLASATVFTIQNQCSYTIWPGTLSGNGAAVLGQGGFVLPPGASINLNAPAGWSGRFWARTGCKFDDAGTGKCLTGDCPGGLNCNGGGTPPVTLAEFTIGSADNGGKDFYDVSLVDGYNVGMGVWATGGTGDCQYAGCIADLNRVCPTELRINDGGSGAVVACKSACLAFNTEVFCCTGKHSTPDRCSATHYSEIFKKACPTAYSYAYDDASSTCTCSGSDYRITFCPKGTS 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03487 251 Gene3D Thaumatin 26 247 IPR037176 -
Car04g03487 251 ProSiteProfiles Thaumatin family profile. 25 249 IPR001938 -
Car04g03487 251 SMART tha2 28 247 IPR001938 -
Car04g03487 251 PANTHER OS03G0233200 PROTEIN 22 247 IPR001938 -
Car04g03487 251 CDD TLP-PA 27 246 - -
Car04g03487 251 SUPERFAMILY Osmotin, thaumatin-like protein 27 248 IPR037176 -
Car04g03487 251 ProSitePatterns Thaumatin family signature. 88 103 IPR017949 -
Car04g03487 251 PIRSF PR5 1 251 IPR001938 -
Car04g03487 251 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Car04g03487 251 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Car04g03487 251 PRINTS Pathogenesis-related protein signature 88 117 IPR001938 -
Car04g03487 251 PRINTS Pathogenesis-related protein signature 237 246 IPR001938 -
Car04g03487 251 Pfam Thaumatin family 32 247 IPR001938 -
Car04g03487 251 PANTHER PATHOGENESIS-RELATED PROTEIN 5 22 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03487 Car-Chr4 63999016 64000278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03487 7 251 Receptor kinase-like Gene Family AT5G38280 42.629 1.14e-58 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03487 - - gmx:100809378 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03487 04 63999016 64000278 Car04g03487 04 63999016 64000278 ECH