Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03472 ATGTTCACtaataataataataataatTCACATCCTATAATAATGCAAAGACTATTTTCACCTTTGTTAGAACCAGACCTATCTTTAAACATAAGTCCACCTTCTAATATTTCAGATTCTGAAGCCAAAGAAATGGAAACCTACAAAAGAGTAAGAACAACTAGTAAACCAGTTTATAATTACAATGATATATCTAATTCATCCACTAATTCTGATTCAGCTAGTAGTGGAAGTGAGTTAAGCCATGAAAATGTCCATAATATCCTTCATCATCATCATCATGAGCCAACTTTGAGATTAGGCTTTGGAAACTCATGTTTCAATCCTCAATATCATCATCTTCATCAACAAGTACAAGGTGTCTCTAGAAACTTCAACCACCATATTCAACCACACATCTATGGCCGCGATTTCAAGCGAAGTTCGAGACTCGTCAATGGTGTCAAAAGAAGTGTGAGAGCTCCAAGAATGAGATGGACTACTACCCTTCATGCTCATTTTGTTCACGCAGTTCAACTTCTTGGTGGTCATGAAAGGGCAACACCAAAATCAGTGTTAGAGTTAATGAATGTTAAGGATCTAACCCTAGCACACGTCAAGAGTCACTTACAGATGTATAGAACAGTGAAGACCACTGACAAAGGAACAGGTCATGCACAGACACAAGGAATTTTTCCTTTGCATGGAGCTAATTCTTCAGCTTGTGAGAGACCAAATAATTTACCACAACCACTCCAAAATTCACAGAGGACATCTTGGCAATCATCAATAGAGACAAATACAAACAATACTGAAGAAAAATCCGAAATTGGTTTAACGTATTCTCATTTGAAAGGAAATGATGCCATGGTGGATTCTACACCATTGACACGTTCCAACACTATGATTGACTTAGAATTCACACTTGGAAGGCCTAATTGGGAAAAAGACCATGCCGAATCATCAAGAGAATTACCTCTTCTCAAGTGTTAA 972 0.3693 MFTNNNNNNSHPIIMQRLFSPLLEPDLSLNISPPSNISDSEAKEMETYKRVRTTSKPVYNYNDISNSSTNSDSASSGSELSHENVHNILHHHHHEPTLRLGFGNSCFNPQYHHLHQQVQGVSRNFNHHIQPHIYGRDFKRSSRLVNGVKRSVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKTTDKGTGHAQTQGIFPLHGANSSACERPNNLPQPLQNSQRTSWQSSIETNTNNTEEKSEIGLTYSHLKGNDAMVDSTPLTRSNTMIDLEFTLGRPNWEKDHAESSRELPLLKC 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03472 323 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 11 323 IPR044847 GO:0000976|GO:0006355|GO:0010158
Car04g03472 323 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 11 323 - -
Car04g03472 323 Gene3D - 154 211 - -
Car04g03472 323 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 155 208 IPR006447 GO:0003677
Car04g03472 323 MobiDBLite consensus disorder prediction 58 81 - -
Car04g03472 323 MobiDBLite consensus disorder prediction 243 268 - -
Car04g03472 323 Pfam Myb-like DNA-binding domain 156 207 IPR001005 -
Car04g03472 323 SUPERFAMILY Homeodomain-like 152 208 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03472 Car-Chr4 63769250 63773748 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03472 121 216 G2-like Transcription Factor Family AT5G42630 78.641 1.58e-51 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Car04g03472 Myb_DNA-binding 1.4e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03472 - - gmx:106795723 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03472 04 63769250 63773748 Car04g03472 04 63769250 63773748 ECH