Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03376 ATGGCATTAGTAATGGTTCCTCAAACCAATGATGTTGAAAATGCAACAATTATGAAACTTGAGTCAGCATATTCTGATTTAGAATCTCTACTTGAAGCATCAAAAGAAATGGAACAAAACATAGAAACAATGGAAACAAGGTTTGATCTTTTACAAGGATCAATAACAACATCATCAAGAAAAATCAACCCTTTACAATCCTTATCCATGTCAAGAAAAGCACTTGACACAAGAATCAACAGAGCAATATCCCCTGCTCTTGCACTTCTTGAAACATTCAAACTCACTGAGTCTCTTCAGAACAATCTCCTTAACCTCTCTTCAAAACTATCATTGGAAAAGACTCATCAAAAGAGGCTACAAAAGCTTCTAGATTACATGGATTGTGTTGATCAGTTGAATGAAGCTATTAATTCAATATGTGAAGTTGTTGAGCCAGTGATTATGAGGCTTCAAGAAGTGGTTGAGTTTATAAGCAGAACAAAAGCAGCTGATTCATACAGAACACAAAGGTTAAGAGAAGCACTTATAACTTTAAAAGCACTTTATGAAACTGAGGTTGATGAAATGAGATTTGAAGGGTTGTTGGATCAAGCTTTGCTTCATATGCAGGATGAGTTTGAGGCTCTTTTGCTTAAATTGAAGCATAGGAAGTTAGGTGATATGTCACATATGCAAAATGTTGGTAATGATTCTGATGAACATTTCAATGTTAGCCTTGAATTGGGATCTGAGTTGGAAATTGAAGTGCTCAGAAGAATTTCAAACACTCTTGCTGCTAATGACTGCTTAGATATATGCATTGATATCTATGTTAAGGTAAGATACAAAAGGGCTGCAAAAGCATTGATGAAGTTAAGCCCTGACTACTTAAGAACATACACACCAGAAGGAATAGATGAAATGGAATGGGAAAATTTAGAAACAGCAATAACCCTTTGGACCCAACACTTTGAAGTTGCAACAAAGAAAGTTCTTTTATCAGAAAAGAATCTCAGCGAAAGTGTTCTAGGTGAAATCATAGACGGATTAATCTATCCAGAATGCTTTGTAAAAATATCAGACAAGATCATGGCTGTGTTTTTTCGATTCGGAGAAGGAGTAGCTAGAAGCAACAAAGAGCCTCAAAAATTGTTCAAACTATTAGACATGTTTGAATCATTGGAGAAACTCAAACCCCATGTACTTGAAATCTTTGAAGGTGAATCAGGAGAGGATATATGCAGGCGGTTTCGCGAGCTCGAGAAGCTTATCGTTGATGCATCGAGTAAAGTTTTTTGGGAATTTGGGTTGCAAATAGAAGGAAATGTTGATGGTCTTCTTCAACCTTTACAAAATGGTTCTGTTCCAAAAATTGTAAGATATGCTGTAAACTATCTTAAGTATCTTTCAACAGTGAATTACAGAACAACAATGGCTAATGTTCTTAGAACAGAACAAAAATGGAAAAATGAGTTTTTGTTATCATCAAAACTCGAGACAGACGAAGATTTATTGAAGCTTGCCATTTGTAATGTAATGGAGGCTCTTCAAAGAAACATAGATTCAAAACGTTTGAGTTGTAAAGACAAGATTTTGGTGCATGTGTTCATGATGAATACTTATTGGTATATATATATGAGAACCAAGAACACAGAACTTTGTGATTTGTTAGGTGAGAAATATATGAAAGAAAATTACAAGGCAGTGGCAGAAGAATCAGCTTACTTGTACCAGAAGCAAGCTTGGTTAGTTTTGGTTAAGATTTTAGATATTGATGAAGAATTAATGGAACAAAAACAAGGGAGAGAAAAAAGCATTGGAAGGCTTGTGAGTGAAAAAATTGATACATTTTTGAAGTGTTTGAGTGAGATTTGTGAGAGGCATAGGAGTTTTTATAGTATAACTGATGTTGATTTGAGGGAACAAATGAGAGATGCAACAGTGAAACTTGTAGTGCCAATTTATGCAGAGTTTTTGGAGTGTTATTCAGGATTGTTGCAGAGGAAAGTGTATCCTAGTTCTCAAAGATTGCAAGGTTTGGTTGGGAAGGCTTTTGCTTCTACTAATGATTTGAATTTCAATGGTGGACGTAATTCTGGTTCTTTGGAAAGGGATATCAAACAATCTAGATGA 2115 0.3513 MALVMVPQTNDVENATIMKLESAYSDLESLLEASKEMEQNIETMETRFDLLQGSITTSSRKINPLQSLSMSRKALDTRINRAISPALALLETFKLTESLQNNLLNLSSKLSLEKTHQKRLQKLLDYMDCVDQLNEAINSICEVVEPVIMRLQEVVEFISRTKAADSYRTQRLREALITLKALYETEVDEMRFEGLLDQALLHMQDEFEALLLKLKHRKLGDMSHMQNVGNDSDEHFNVSLELGSELEIEVLRRISNTLAANDCLDICIDIYVKVRYKRAAKALMKLSPDYLRTYTPEGIDEMEWENLETAITLWTQHFEVATKKVLLSEKNLSESVLGEIIDGLIYPECFVKISDKIMAVFFRFGEGVARSNKEPQKLFKLLDMFESLEKLKPHVLEIFEGESGEDICRRFRELEKLIVDASSKVFWEFGLQIEGNVDGLLQPLQNGSVPKIVRYAVNYLKYLSTVNYRTTMANVLRTEQKWKNEFLLSSKLETDEDLLKLAICNVMEALQRNIDSKRLSCKDKILVHVFMMNTYWYIYMRTKNTELCDLLGEKYMKENYKAVAEESAYLYQKQAWLVLVKILDIDEELMEQKQGREKSIGRLVSEKIDTFLKCLSEICERHRSFYSITDVDLREQMRDATVKLVVPIYAEFLECYSGLLQRKVYPSSQRLQGLVGKAFASTNDLNFNGGRNSGSLERDIKQSR 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03376 704 Coils Coil 17 47 - -
Car04g03376 704 PANTHER EXOCYST COMPLEX PROTEIN EXO70 14 680 IPR004140 GO:0000145|GO:0006887
Car04g03376 704 PANTHER OS08G0519900 PROTEIN 14 680 - -
Car04g03376 704 Gene3D Exocyst complex component Exo70 165 684 - -
Car04g03376 704 Pfam Exo70 exocyst complex subunit 314 660 IPR046364 GO:0000145|GO:0005546|GO:0006887
Car04g03376 704 SUPERFAMILY Cullin repeat-like 186 657 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03376 Car-Chr4 62294366 62297087 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03376 5 662 EXO70 exocyst subunit family AT4G31540 27.043 1.24e-64 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03376 - - aip:107605596 966.066